Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01986 ATGGATCATAAAAGACCATATCATACCCTTGTTATGCTCTTTGTGTTGGCCATTTGTTTTGAGCCATCGTTGGGAGACACAAATGCTCAAATTTTGATGAGGTTTAAAGGTTCCTTGTCAAATGGCAAAGCCTTAACCAACTGGGGGAACGAGTCTAGTTTATGTAACTGGACTGGGTTGTTATGCCACGCAAACCAAACATTTTATGGCTTGAGACTGGAGCATATGGGACTGGGTGGGACGATTAATGTAGAAACCTTATTTGAATTGCCAACATTGGTAAGCTTTAGTGTCATTAACAATACATTTGAGGGTCCAATGCCTGAGTTCAAAAAGCTTGTCACGTTAAGGGCATTGTTTCTGTCCAATAACAAGTTTTCTGGTGATATTCCGGATGATGCTTTTGAGGGCATGAGGAAACTGAAAAGGGTATTCTTGGCAGAAAATGGCTTCACTGGTCGTATTCCAAAGTCACTTTCTAACTTGCCAAGACTCTTGGATTTGGACTTACGCCGGAATGGTTTTGGAGGAAACATACCAGAATTTCAACAGCAGGATTTCAGAGTGTTTAATTTGTCTTATAACCAATTGGAGGGTCAGATACCAGAAAGCTTAAGCAACATGTATCCAAGTTCATTTGCTGGCAACGAAGGGCTTTGTGGAAAACCTCTAAGTTACTGCAATCATTATGGTGGCAACGAATCTAGATCAGTGGATCCCAACCCTGCTTCACCTCAAAGAAAGGGAAAGAAACACAGAATCCTTATAACTGTCATTATAGTAGTGGCAGTGGTTGCTTTTGCTTCAATAGTTTCACTTCTATTTATTCATAACCACAGGAGAAAAAGATTTCAACCCGGAATAGTAGCCAACCAGACAAATTCCCAGAAAAGTGCAGGCTTCAAAGAATCACAATCCATTGATCTGACAGCTGATTTCAAGGGTGGAGATGGCGAATTGAACTTTGTTAGGGAAGACAAAGGAGGATTTGATTTGCAAGAGCTGCTTAGAGCCTCAGCAGTGGTTCTTGGTAGTGGCAGTTTCGGGTCCAGTTACAAGGCTATGATTTTGGGTGGACCAACAGTGGTTGTTAAGAGGTTTAGGCACATGAACAATGTTGGGAAACAGGAATTCAGTGAGCACATGCAAAGGCTTGGAAGTTTGACACACCCTAATCTTCTCCCTCTTGCAGCATTCTACTACAGAAAAGAAGATAAGTTCTTGGTTTATGACTTCGCTGAAAATGGCAGCTTGGCCAGTCATCTACATGGCAGAAATGACTCTGTTCTAACTTGGTCCACCCGTTTAAAAATCATAAAAGGGGTGGCAAGGGGCTTAGCCTACCTCTGTGAAAACTTCCCTGGGAAAAGCCTACCTCATGGTCATCTCAAGTCCTCTAATGTGGTGCTGGATCATTCATTTGAGCCACACTTGACTGAGTATGGCCTTGTGGAAGTGATGAGTAAGAGCCATGCTCAGAAGTTCATGGCAGCCTACAAGGCCCCAGAGATCAGCAAATTTGGTAGGCCAAATGTGAAAAGTGATGTGTGGTGTCTGGGGATCCTCATTCTGGAGGTGTTGACAGGGAAATTCCCAGCAAATTATCTGAGACCTGGGAAGGGTGGGAATAATGCTGACTTGGCAACATGGGTGGATTCAGTTGTGAGGGAAGAATGGACTGGTGAGGTGTTTGATAAGGACATCTTGGGGACTAGGAATGGGGAGGGTGAGATGATGAAGCTGTTGAGGATTGGGATGTTTTGCTGCAAATGGAGTGTGGAGAATAGGTGGGATTGGAGGGAGGCAGTGGCCAAGATTGAGGAGGTAAAGGAGAAAGATGGTGAGGATGATTATTCTTCTTATTATGTCAGTGATGGGGATTTCAATTCAAGGACTATGACTGAAGATGAGTTTTCTTTCTCTATCACTAATTGA 1935 0.4315 MDHKRPYHTLVMLFVLAICFEPSLGDTNAQILMRFKGSLSNGKALTNWGNESSLCNWTGLLCHANQTFYGLRLEHMGLGGTINVETLFELPTLVSFSVINNTFEGPMPEFKKLVTLRALFLSNNKFSGDIPDDAFEGMRKLKRVFLAENGFTGRIPKSLSNLPRLLDLDLRRNGFGGNIPEFQQQDFRVFNLSYNQLEGQIPESLSNMYPSSFAGNEGLCGKPLSYCNHYGGNESRSVDPNPASPQRKGKKHRILITVIIVVAVVAFASIVSLLFIHNHRRKRFQPGIVANQTNSQKSAGFKESQSIDLTADFKGGDGELNFVREDKGGFDLQELLRASAVVLGSGSFGSSYKAMILGGPTVVVKRFRHMNNVGKQEFSEHMQRLGSLTHPNLLPLAAFYYRKEDKFLVYDFAENGSLASHLHGRNDSVLTWSTRLKIIKGVARGLAYLCENFPGKSLPHGHLKSSNVVLDHSFEPHLTEYGLVEVMSKSHAQKFMAAYKAPEISKFGRPNVKSDVWCLGILILEVLTGKFPANYLRPGKGGNNADLATWVDSVVREEWTGEVFDKDILGTRNGEGEMMKLLRIGMFCCKWSVENRWDWREAVAKIEEVKEKDGEDDYSSYYVSDGDFNSRTMTEDEFSFSITN* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01986 644 FunFam Nuclear pore complex protein NUP107 25 181 - -
Phac8g01986 644 Gene3D Transferase(Phosphotransferase) domain 1 413 628 - -
Phac8g01986 644 SUPERFAMILY Protein kinase-like (PK-like) 342 607 IPR011009 -
Phac8g01986 644 Pfam Protein tyrosine and serine/threonine kinase 342 534 IPR001245 GO:0004672|GO:0006468
Phac8g01986 644 Gene3D Ribonuclease Inhibitor 25 185 IPR032675 -
Phac8g01986 644 Pfam Leucine rich repeat N-terminal domain 29 62 IPR013210 -
Phac8g01986 644 ProSiteProfiles Protein kinase domain profile. 337 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01986 644 Gene3D Phosphorylase Kinase; domain 1 317 412 - -
Phac8g01986 644 Pfam Leucine rich repeat 115 174 IPR001611 GO:0005515
Phac8g01986 644 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 614 IPR046959 -
Phac8g01986 644 SUPERFAMILY L domain-like 48 215 - -
Phac8g01986 644 Gene3D Ribonuclease Inhibitor 186 228 IPR032675 -
Phac8g01986 644 FunFam Pollen receptor-like kinase 1 413 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01986 Phac-Chr8 25970064 25974232 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01986 7 630 Receptor kinase-like Gene Family AT5G35390 46.319 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac8g01986 PK_Tyr_Ser-Thr 2.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01986 - - gmx:100781593 1021.92