Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01976 ATGTTGGATTACGAATGGAACACATCAATGATACTACTCGCCGGAAATGAAGGCGCTGGCGGCGAACCCGACCAAACGCGCCGGCAAATCTTCGACCACAACTTCGCCATGTTAACTGACCCCATTCTACATGGCTCAACACCAACAGCCACCACTGGTTTCTCACATCACCACCCCTTCAACCCACCACAACAGCACCACCAGCAGGCCTTCTTGGACCCACGTGCCTACCAAAGCGCGTCCACCACTTCCTTCTCGCCACCACCTTCGGTGCTCTCACTTAACCCAATCCCACCTTTAGCCCCCTCCCACTGTGGGCTTGGACCTGGCTCCGGGCTTGGATTTCTGCTCATGTCCAAGTCTGAGGATGTCACTTCGCCCATGAACTTCGACGGCTCTGGTCATGGTCTCGGGCCTGGGCTTGGACTCAACCTCGGAGGCCGCACTTATTTTGCGGCTTCCAACGAAGACACCCTGGACAGATTCTACCGTTCCAAGACCGTGGAATCGGTTTCCACGGTGTCGTCAAATTTGCCACGCTGTCAGGCAGAAGGATGTAATACGGACCTCTCCGAAGCCAAGCACTACCACCGCCGCCACAAAGTTTGTGAGTTCCACTCCAAGGCTGCCACCGTCATTGCCGCCGGGTTGACTCAGCGATTCTGCCAGCAGTGCAGCAGGTTGTGGTTTTTCGGGGAGGGGATTTTACACAATTACGAATTTGCAACTGGGTGTTTATGTTTGAACCAATCATTGGCTCCGGGGTGA 768 0.5495 MLDYEWNTSMILLAGNEGAGGEPDQTRRQIFDHNFAMLTDPILHGSTPTATTGFSHHHPFNPPQQHHQQAFLDPRAYQSASTTSFSPPPSVLSLNPIPPLAPSHCGLGPGSGLGFLLMSKSEDVTSPMNFDGSGHGLGPGLGLNLGGRTYFAASNEDTLDRFYRSKTVESVSTVSSNLPRCQAEGCNTDLSEAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRLWFFGEGILHNYEFATGCLCLNQSLAPG* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01976 255 Gene3D - 177 238 IPR036893 GO:0003677|GO:0005634
Phac8g01976 255 SUPERFAMILY SBT domain 179 233 IPR036893 GO:0003677|GO:0005634
Phac8g01976 255 ProSiteProfiles Zinc finger SBP-type profile. 178 255 IPR004333 GO:0003677
Phac8g01976 255 Pfam SBP domain 181 228 IPR004333 GO:0003677
Phac8g01976 255 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 136 227 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01976 Phac-Chr8 25694744 25698607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01976 1 228 SBP-box Gene Family AT1G02065 39.764 1.79e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Phac8g01976 SBP 3.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01976 - - var:108328505 413.69