Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01964 ATGAACACCAAAAGCATCACCTCAAATCCACCATGGATTCTCTTCACTACACTTTTTCTCTCGTCTTTCTCCCTCTCACTCTCCGATCCAAGAATCACCGAAGCAGGACTCTACTGTGGAACCACCAAGGCCCCTCTGAAAGCCAACTACATACCAAGTTTCACCAAGGAAATGGAGAGCATCTCGCAGTTGGTGACCAAACACAACTGGGGCACTCACGTTGTCAACATTTCAGGCTCGTCCATTCCAATTTATGGCTTTGCACAATGCTTCAAGGACCTCTCCAACACCGATTGCCTTCTCTGCTACGCCGCAAGCCGTACCAAGCTTCCACGCTGCCTACCTTCTGTCTCTGCGCGCATCTACCTTGATGGCTGCTTCTTGCGCTATGACAACTACAGCTTCTATGCGGAGGTTAGTGACCCTTTGAGGGATACAGTGAACTGCACCTCACAGCATGGGACGGTTGTTGATAAAACTGAGAGGTTGGAACTTGAGGAGAGCGTTGGAAGGGTAGTTGAGAGTGTGACCAACAGGGCTCTGGCAAAAGGTGGTGGCTTTGCTGTGGGAGAGGTTGAGGGGGTTTATGCATTGGCACAGTGCTGGAATACCATTGGGAATGATGGGTGTAGAGAGTGTTTGAGGAAAGCTGGGAAGGAGGTGAGAGGGTGCTTGCCAAAGAGGGATGGGAGGGCCTTGAATGCTGGCTGTTATTTGAGGTATTCAACAAATAAGTTCTACAATGAAGATGGCGATGCAGGTGGTAAAAATGGATTCTTAAGAAGAGGAGTCATAATCGCAGAAGTGTTAGCAGCAGCTGCAGTTTTAATGCTTACCCTCTCTGCCTCCTATGTAGCCTTCACAAAATTAACTAGGATAAAAAAAGAAAACAATAATCTTGGTCAGATTTCCTCTTCCATAAGCAAATCTAGCTTGAATTACAAGTACGAAACTCTTGAAAAGGCCACAGATTATTTTAACTCTTCAAGGAAAATAGGCCAAGGTGGAGCTGGCTCAGTTTTCAAAGGTATTCTCCCAAATAAGAAAGTTATTGCGGTTAAGAGATTGATCTTCAATAACAGGCAATGGGTGGATGAGTTCTTCAACGAAGTGAATTTGATTAGCGGAATTGAACACAAGAACCTTGTCAAACTATTGGGATGTAGCATTGAAGGCCCTGAGAGCCTCCTTGTGTATGAGTACTTGCCCAAAAAGAGTTTAGACCAATTTATCTTCGAGAAAAACAGAACTCAGATTCTAAACTGGAAGCAGAGGTTTAATATCATTCTTGGAACTGCAGAGGGGCTTGCATATCTTCATGAAGGTACCAAAATAAGAATCATCCATCGAGATATCAAAAGCAGCAATGTTCTTCTGGACGAGAATCTCACTCCCAAGATTGCAGATTTCGGCCTTGCCCGGTGTTTTGGAGCTGATAAGTCCCATTTGAGCACTGGAATTGCTGGAACACTAGGTTACATGGCTCCTGAGTACCTAATCAGAGGACAACTTACTGATAAAGCTGATGTGTATAGTTTTGGAGTACTTGTTCTTGAGGTTGTATGTGGGAGGAGGAACAATGTCTTCCGAGAGGACTCTGGCTCGCTTCTACAAACTGTTTGGAAACTTTACCGATCAAACACATTAACTGAAGCTGTTGATCCTTGCTTGGGAGATGATTATCCTGCAACTGAAGCATCAAGGGTGTTTCAAATTGGATTGCTTTGCACACAAGCTTCTGCCTCCCTAAGACCATCCATTTCTCAAGTTGTTTACATGCTAACTAATTCAAATGAAGACGTTCCCACTCCACATCAGCCCCCATTTTTGAACACTGGAATGCTGGACTCAGATGGTTCCATTAAGTCTTATACCACTAACAGCTTCATATCCAATGCCTTGAAGAAGATTGGAGTATCCTACATCTACTCAGAGTCCTCTAGTTCACGCAACTCAGATGGGCCATCAAGAAGTGAAGAATCAATTGTTCAAGTTTGA 1998 0.4429 MNTKSITSNPPWILFTTLFLSSFSLSLSDPRITEAGLYCGTTKAPLKANYIPSFTKEMESISQLVTKHNWGTHVVNISGSSIPIYGFAQCFKDLSNTDCLLCYAASRTKLPRCLPSVSARIYLDGCFLRYDNYSFYAEVSDPLRDTVNCTSQHGTVVDKTERLELEESVGRVVESVTNRALAKGGGFAVGEVEGVYALAQCWNTIGNDGCRECLRKAGKEVRGCLPKRDGRALNAGCYLRYSTNKFYNEDGDAGGKNGFLRRGVIIAEVLAAAAVLMLTLSASYVAFTKLTRIKKENNNLGQISSSISKSSLNYKYETLEKATDYFNSSRKIGQGGAGSVFKGILPNKKVIAVKRLIFNNRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLVYEYLPKKSLDQFIFEKNRTQILNWKQRFNIILGTAEGLAYLHEGTKIRIIHRDIKSSNVLLDENLTPKIADFGLARCFGADKSHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSFGVLVLEVVCGRRNNVFREDSGSLLQTVWKLYRSNTLTEAVDPCLGDDYPATEASRVFQIGLLCTQASASLRPSISQVVYMLTNSNEDVPTPHQPPFLNTGMLDSDGSIKSYTTNSFISNALKKIGVSYIYSESSSSRNSDGPSRSEESIVQV* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01964 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Phac8g01964 665 Gene3D Transferase(Phosphotransferase) domain 1 402 605 - -
Phac8g01964 665 FunFam Cysteine-rich receptor-like protein kinase 2 402 602 - -
Phac8g01964 665 FunFam Cysteine-rich receptor-like protein kinase 3 147 246 - -
Phac8g01964 665 SUPERFAMILY Protein kinase-like (PK-like) 309 617 IPR011009 -
Phac8g01964 665 SMART serkin_6 326 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01964 665 Gene3D Phosphorylase Kinase; domain 1 285 401 - -
Phac8g01964 665 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Phac8g01964 665 MobiDBLite consensus disorder prediction 645 665 - -
Phac8g01964 665 ProSiteProfiles Protein kinase domain profile. 326 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01964 665 Pfam Salt stress response/antifungal 54 133 IPR002902 -
Phac8g01964 665 Pfam Salt stress response/antifungal 164 243 IPR002902 -
Phac8g01964 665 Pfam Protein kinase domain 327 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01964 665 FunFam Cysteine-rich receptor-like protein kinase 2 32 135 - -
Phac8g01964 665 Gene3D - 147 246 IPR038408 -
Phac8g01964 665 Gene3D - 35 135 IPR038408 -
Phac8g01964 665 FunFam Cysteine-rich receptor-like protein kinase 2 292 401 - -
Phac8g01964 665 CDD STKc_IRAK 332 596 - -
Phac8g01964 665 ProSiteProfiles Gnk2-homologous domain profile. 144 246 IPR002902 -
Phac8g01964 665 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 85 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01964 Phac-Chr8 25269416 25273497 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01964 3 491 Receptor kinase-like Gene Family AT5G40380 55.918 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac8g01964 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01964 - - gmx:100790404 1098.57