Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01951 ATGGAGTTTAGTCCAAGCTTCCCTGAGAAAATTCACTACCTTTCTGGGATTTTCCCTGAAATCAAATCAGAGATTCCTGCGTCAGAAGAGAACACCAGCTTCATGTATCAAAACAATTTCAACCATTTCCAGCACCACCATCATCACCTGAATGAGCCAAATCACGGCCACCCTGAAAGTTTTTTCACAGAGGGTCCTTCCTCCATCATCAACCCATTATTCTCTTTGTCCTCAGCAAACCATTCTTCAGGTGGACCATCTTCCTACAAATCCACTTACCCCAATGAATCCCTCAAAGGAGGCTATGCCAACCCCTACTACCCCATGCCTTATGCACCAAACAACACCAATGTTGAATCCATGCATGGCCACCCCAACAAGGTCATCTGGGACTTTTCCCAGAAAGTTCCCCTTCACTCTGGCCCAAGTGCAACTTCAGATCCTCAGGTGCAGAGGAAAACTAATGGCCAAAATCAACACAGGATGACCAACATAATCAAAGGCCAGTGGAGTGCTGAGGAGGACAGCGTCCTTGTCCAATTGGTGAAACGCTTTGGGATCAAAAAATGGTCCCATATCGCCAGGTTGCTGAATGGCAGGGTTGGGAAACAGTGCAGAGAGAGGTGGCACAATCATCTCCGGCCAAACATTAGGAAGGAGTCATGGAGCGAAGAGGAGGACAAAATCCTGATTGAAGCTCACAAGGAACTCGGGAACAAATGGGCAGAGATTGCAAGGAGAATGCCGGGAAGGACTGAAAACACCATCAAGAACCACTGGAACGCTACCAAGCGTCGCCAGAAGGCCAAGAGGCAGAGGAGCAAGCGCAGGAACTCCAAGGGTGCACCCACGCTTCTCGAGAGCTACATAAGGAAAGTCACTGCGGCGGAAGAGTCTGAGAAGGAATTGAAGAACTGCATGAGCAAGATGAACTTGAATGAGACCACCAATGCGGGTCTCTTTCGGGTTCGGTACGAGAGCTCCGAAGGTGACTTCAGCTCGGAGGAGGAGGAGGTTGGGTGGAGCCTGCAGCACCACGCGCCATGTGGTGGTGATGGTGGCTATGTGCCACTGATGGTGAACGCTGGGGAAGAGAGCCTCATTGATTACGAGGTTGCCTTGCAGATGGCACCGGAGGTGCAGATGAGGAAGGAGATGGATCTCATGGAGATGATCTATAGAAAAGGTTAA 1191 0.4996 MEFSPSFPEKIHYLSGIFPEIKSEIPASEENTSFMYQNNFNHFQHHHHHLNEPNHGHPESFFTEGPSSIINPLFSLSSANHSSGGPSSYKSTYPNESLKGGYANPYYPMPYAPNNTNVESMHGHPNKVIWDFSQKVPLHSGPSATSDPQVQRKTNGQNQHRMTNIIKGQWSAEEDSVLVQLVKRFGIKKWSHIARLLNGRVGKQCRERWHNHLRPNIRKESWSEEEDKILIEAHKELGNKWAEIARRMPGRTENTIKNHWNATKRRQKAKRQRSKRRNSKGAPTLLESYIRKVTAAEESEKELKNCMSKMNLNETTNAGLFRVRYESSEGDFSSEEEEVGWSLQHHAPCGGDGGYVPLMVNAGEESLIDYEVALQMAPEVQMRKEMDLMEMIYRKG* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01951 396 MobiDBLite consensus disorder prediction 262 283 - -
Phac8g01951 396 MobiDBLite consensus disorder prediction 138 157 - -
Phac8g01951 396 MobiDBLite consensus disorder prediction 262 278 - -
Phac8g01951 396 SUPERFAMILY Homeodomain-like 164 260 IPR009057 -
Phac8g01951 396 FunFam Transcriptional activator Myb isoform A 166 219 - -
Phac8g01951 396 CDD SANT 170 213 IPR001005 -
Phac8g01951 396 Gene3D - 220 284 - -
Phac8g01951 396 SMART sant 166 215 IPR001005 -
Phac8g01951 396 SMART sant 218 266 IPR001005 -
Phac8g01951 396 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 213 IPR017930 -
Phac8g01951 396 ProSiteProfiles Myb-like domain profile. 214 264 IPR001005 -
Phac8g01951 396 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 214 268 IPR017930 -
Phac8g01951 396 ProSiteProfiles Myb-like domain profile. 162 213 IPR001005 -
Phac8g01951 396 CDD SANT 221 264 IPR001005 -
Phac8g01951 396 PANTHER MYB PROTEIN-RELATED 155 279 - -
Phac8g01951 396 Pfam Myb-like DNA-binding domain 170 227 - -
Phac8g01951 396 Gene3D - 166 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01951 Phac-Chr8 25110966 25115995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01951 163 293 MYB Transcription Factor Family AT4G18770 67.176 1.05e-61 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac8g01951 Myb_DNA-bind_6 1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01951 K09422 - gmx:100793032 436.032