Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01946 ATGGCCTCTACTATTGGTATACCAGGTGATGATTCCATGATTGTTGAAAAGCTCCCGGAGGAGATTAATGAAATGAAGATCAAGGATGAAAAGGTATTGGATGAAAAGGAAATGGATACTGCAATGGTGGATGGAAATGGAACTGAAACTGGCCGTATTATTGTGACCACTATTGGTGGTCGACTAGGTCAACCCAAACAGACTATAAGTTACATGGCAGAACGTATTGTTGGACAAGGCTCATTTGGTATTGTGTTTCAGGCTAAATGTCTTGAAACTGGAGAAACTGTAGCAATCAAGAAAGTTTTGCAGGATAAAAGATACAAGAATCGTGAATTGCAAACAATGCGCCTTCTTGATCATCCTAATGTTGTATCACTCAAACATTGCTTCTTTTCCACCACAGACAAAGATGAACTCTATCTCAATTTGGTACTTGAATATGTACCTGAGACTGTGTATCGTGTGGTGAAGCACTATAGCAAGGCAAATCAGCGGATGCCCCTAATATATGTTAAACTTTACACATATCAGATTTGTAGAGCCTTGGCTTATATTCATGGATGTGTTGGAGTGTGCCACAGGGACATTAAGCCACAGAATCTACTGGTAAATCCTCATACACATCAGGTCAAACTTTGTGATTTTGGGAGTGCAAAAGTTCTGGTGAAGGGTGAACCTAACATATCATATATCTGCTCTCGATACTATCGAGCTCCCGAACTCATATTTGGGGCCACTGAGTATACTACTGCAATTGATATGTGGTCTGTTGGTTGTGTGCTGGCTGAGCTGCTCCTGGGGCAGCCTCTGTTTCCAGGAGATAGTGGAGTTGATCAACTTGTTGAAATTATCAAGGTACTCGGGACTCCAACTCGTGAGGAAATAAAATGCATGAATCCAAATTACACAGAGTTCAAGTTCCCTCAAATCAAAGCTCACCCTTGGCATAAGATATTCCACAAGCGTATGCCCCCAGAAGCAGTAGATCTTGTTTCAAGGCTTCTCCAGTATTCTCCAAATTTACGAAGTACCGCTTTGGATGCATGTGTCCACCCATTTTTTGATGAACTCCGCGACCCTAATACCCGTCTCCCTAATGGGCGCCCTATGCCACCCCTCTTTAATTTCAAACCTCAAGAGCTGAAGGGAGTGACTTTGGAGCTGCTATGCAAACTTGTTCCAGAACATGCTCGGAAACAGTGTCCATCCCTTAATTTCTAG 1224 0.4248 MASTIGIPGDDSMIVEKLPEEINEMKIKDEKVLDEKEMDTAMVDGNGTETGRIIVTTIGGRLGQPKQTISYMAERIVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTDKDELYLNLVLEYVPETVYRVVKHYSKANQRMPLIYVKLYTYQICRALAYIHGCVGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRSTALDACVHPFFDELRDPNTRLPNGRPMPPLFNFKPQELKGVTLELLCKLVPEHARKQCPSLNF* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01946 407 ProSitePatterns Protein kinases ATP-binding region signature. 77 101 IPR017441 GO:0005524
Phac8g01946 407 ProSiteProfiles Protein kinase domain profile. 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01946 407 FunFam Shaggy-related protein kinase kappa 151 399 - -
Phac8g01946 407 Gene3D Phosphorylase Kinase; domain 1 56 150 - -
Phac8g01946 407 Gene3D Transferase(Phosphotransferase) domain 1 151 399 - -
Phac8g01946 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Phac8g01946 407 Pfam Protein kinase domain 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01946 407 SMART serkin_6 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01946 407 FunFam Glycogen synthase kinase-3 beta 55 150 - -
Phac8g01946 407 SUPERFAMILY Protein kinase-like (PK-like) 70 380 IPR011009 -
Phac8g01946 407 CDD STKc_GSK3 66 358 IPR039192 -
Phac8g01946 407 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 35 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01946 Phac-Chr8 25078282 25084232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01946 77 363 Core Cell Cycle Gene Families AT1G76540 34.915 4.04e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Phac8g01946 Pkinase 1.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01946 K00924 - jre:108992860 767.689