Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01909 ATGGAAAACCATTTCTTCCTCAATGCTGCTGTGCCCCCTCAGCTGCATTTTCAGCCTTCACCACCTCCTTGTCCACCCTCTTGGCACTCACTCTCTTCTCCCATGGATGTTCAACTCTTGAATTCTTCAACCGACCGGACGCAGGATTGCTTTTATACACCATCGTGGGACAAGTCAACGGATCATGCTGTTCAGTTTGATTCTGCACTCAGTTCCATGGTGTCCTCTCCTGCAGCTTCCAATTCCAACATGTCAAGTGACAATTTTGTCATCAGGGAGTTGATTGGGAAACTGGGAAACATTGGTGGTGGTGGTGGTGGTGGTGGCTCTGATGAGATCTCGCCTCATTCTCAGCCTTTGCTTGGTGCATCTTCCTACATCAATGGCAATAACAGCACCAACACTTCATGTTACAGCACCCCTTTGAGTTCTCCTCCAAAGGTGAACATGAACAAGATCCCCTCAATGATGAATCACTTGGTGAAAGAGGGCGTGCCCCCCAGTTTGGGGACGTCAATGTCCTTGAATTCCACTGTGGCAGAATTCTCAGCTGATCCTGGCTTTGCCGAGAGGGCTGCAAAGTTTTCTTGCTTTGGAAGTAGGAGTTTCAATGGCAGGACCACCCAATTGGGCCCCAACAATCCTGAGTTGACTCACAGATCTTCTCCATTGGTGGAAAATGGGAAGCTCCCTAGAGTCTCAAGTAGTCCATCTCTCAAAGTGCTTGGATCTCAAATGAGTGCCCAGGAGAACAATAATTCTCCATTGCAAGACCAAATGGAAGTGGCCAATTCTCAAGAGGAATCAACAATCTCAGAACAAATTCCAAATGGGGACAATGGGGTGAAACCTTCCCCTTATGCGAATTCTAGAAAAAGAAAAGGTCCATCCAAAGGAAAAGCCAAGGAAACTTCAACCCCCACCAACCCCCCTATGGCTGCCGAAGCTAGTGAAGATTCAAATGCAAAGCGCAGCAAGCCTGAGGAGGGTGAAGGGAATGAAAATGGGCAAGTGAAGGCAGAGGAAGAGTCCAAAGGGGTAACTAGCAATGCAGATGATGACAAACAGAACAGGAGTAACTCAAAACCTCCAGAGGCACCAAAGGATTACATTCATGTCAGAGCAAGAAGAGGTCAAGCCACTGACAGTCATAGTCTTGCAGAAAGAGTCCGGAGGGAGAAAATCAGCGAAAGAATGAAGCTTCTCCAAGATCTTGTCCCAGGTTGCAATAAGGTCACAGGTAAAGCACTTATGCTTGATGAAATTATAAACTATGTCCAGTCATTGCAGCGCCAAGTTGAGTTTCTGTCTATGAAGTTGGCTTCTGTTAACACCAGGCTGGATTTTAGTATTGAGAGTCTAATCTCGAAAGATATATTTCAATCAAATAATTCTTTGGCACACCCAATATTCCCACTAGATTCCTCAGCACCAGCCTTTTATGGGCAACACCCTCAGCAAAACCCAGCAATCCACAGTAACATTCCTAATGGAACTGTGTCCCACACCTCAGTGGACCCATTAGATACTGGTTTGTGCCAAAACCTTGGCATGCAGTTACCTCACCTAAATGCCTTTAATGAAGGTGCCTCTCAGTATCCAATAACATTCTCTGAAGATGACCTCCACACCATTGTTCAGATGGGATTTGGCCAAACTGCAAATAGGAAAACACCAATACAATCTCAGAGTTTCAATGGTAACTAA 1707 0.4587 MENHFFLNAAVPPQLHFQPSPPPCPPSWHSLSSPMDVQLLNSSTDRTQDCFYTPSWDKSTDHAVQFDSALSSMVSSPAASNSNMSSDNFVIRELIGKLGNIGGGGGGGGSDEISPHSQPLLGASSYINGNNSTNTSCYSTPLSSPPKVNMNKIPSMMNHLVKEGVPPSLGTSMSLNSTVAEFSADPGFAERAAKFSCFGSRSFNGRTTQLGPNNPELTHRSSPLVENGKLPRVSSSPSLKVLGSQMSAQENNNSPLQDQMEVANSQEESTISEQIPNGDNGVKPSPYANSRKRKGPSKGKAKETSTPTNPPMAAEASEDSNAKRSKPEEGEGNENGQVKAEEESKGVTSNADDDKQNRSNSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASVNTRLDFSIESLISKDIFQSNNSLAHPIFPLDSSAPAFYGQHPQQNPAIHSNIPNGTVSHTSVDPLDTGLCQNLGMQLPHLNAFNEGASQYPITFSEDDLHTIVQMGFGQTANRKTPIQSQSFNGN* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01909 568 MobiDBLite consensus disorder prediction 319 387 - -
Phac8g01909 568 Pfam Helix-loop-helix DNA-binding domain 383 430 IPR011598 GO:0046983
Phac8g01909 568 Gene3D - 376 451 IPR036638 GO:0046983
Phac8g01909 568 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 259 487 IPR024097 GO:0006355
Phac8g01909 568 Coils Coil 426 446 - -
Phac8g01909 568 MobiDBLite consensus disorder prediction 301 315 - -
Phac8g01909 568 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 377 448 IPR036638 GO:0046983
Phac8g01909 568 CDD bHLH_AtBPE_like 369 454 - -
Phac8g01909 568 MobiDBLite consensus disorder prediction 228 279 - -
Phac8g01909 568 MobiDBLite consensus disorder prediction 200 221 - -
Phac8g01909 568 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 379 429 IPR011598 GO:0046983
Phac8g01909 568 SMART finulus 385 435 IPR011598 GO:0046983
Phac8g01909 568 FunFam Basic helix-loop-helix transcription factor 376 448 - -
Phac8g01909 568 MobiDBLite consensus disorder prediction 200 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01909 Phac-Chr8 18320392 18323816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01909 1 539 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 43.636 1.84e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac8g01909 HLH 4.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01909 - - gmx:100787699 882.863