Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01896 ATGAACAACAACGTTGTTCATTTCCTCATGCACTCTCTTCTCCTCAATCCCATTTTCCTTAATGTCTTATCCGCCTCCCTCCACTGTCTCTTATTGCTATCAGCTTCGCTGTCATGGCTTTGGAACAAAATGACATTCACGCCAGGAACCGGGGAAGAAGACTCTAAGGAGAAAGAGAAACCCAATGACCGTGAGACCCTCTTCAAAACGACCGTGTTTTGTTCTCTTGGTGTTTCTGCTTTCAGTTTCGTTCTCTGTTTCTTCAATTACTTCTATTGGTATACTAGTGGGTGGTCAGAACAAAAGTTTATGACTCTTTTGGATTTGGCTCTCAAAACACTTGCTTGGGGTGTTGTTTGCGTTTCCTTGCACAAAGGGTTCTTCGTTTTTGGTTCCGGTGAAAGAAGGTTCAGGTTTTCATTCATCTTCAGAGTTTGGTGCGCCTTGTATCTCGTTTTTTCTTGTTATTCCTTCGTGGTGGATATTGTTGTTGTGACCAAGATACCTACTCAGTTATTGGTTTATGATGTTGTGTCCACCTGTGCTGGGTTTTTGTTTTTTTACGTCGGGTACTTTGTGAAAAAAAAGGGTCACGTTAACGGTATCGATGAACCTCTTTTGAATGATGATGCAAAAGAGACCAAGGGTGGGGACAATGTTACTCCTTTCTCACATGCTGGAGTTTTTAGCATTCTCACTTTCGCTTGGGTGGGTTCTCTTGTGGCTGCTGGCTACAAAAAGACCTTGAACCTTGAGGATGTTCCTCTGCTAGACAACAAAGACAGTGTGGCTGGTGCTTTTCCTAGTTTCAGAGATAGACTTGAGGTTGATTATGGTGCAAATGCAATTAACAGTCTCACCACGCTTAAGCTGGTGAAGAGTTTAGTAATGTCAGCGTGGAAGGAAATTCTGTTCACAGCTTTTCTTGCATTGTTAAGCGCCTTGGCTTCTTATGTTGGTCCTTACCTTATTGAAGGTTTTGTTCAGTATCTTGATGGACAAAGACAGTATGAAAACCAGGGTTATGTTTTGGTTTCTGCCTTTTTCTTTGCAAAAATTGTGGAGTGCCTCTCTCAAAGGCATTGGTTCTTTAGGTTGCAGCAGATTGGACTTCGAATTCGAGCACTGCTTGTTGTGATGATCTACAATAAGGCTCTCACAGTTTCTTGTCAATCAAAGCAGGGCCACACTTCCGGGGAAATAATCAATTTCATGACTGTTGATGCTGAAAGAGTTGGTGTCTTCAGTTGGTACATGCATGATTTGTGGATGGTGGCGCTGCAAGTCGCATTGGCCTTGTTGATTTTGTATAAAAACCTTGGCCTTGCTTCCGTTGCTGCTCTTGTTGCAACCATTGTTGTTATGTTGGCAAATGTTCCCTTGGGGTCATTACAAGAGAAGTTTCAAAATAAGTTGATGGAGTCAAAAGATATTAGAATGAAGGCCACATCCGAGATTTTGAGGAACATGAGGATCCTCAAACTACAAGGTTGGGAAATGAAGTTTCTATCAAAAATAACTGAGCTCAGGAAAACTGAGGAAGGCTGGTTAAAAAGCTTTGTTTATACCTCAGCCATGACCACATTTGTGTTTTGGGGTGCACCCACATTTGTATCTGTGGTTACTTTCGGCACTTGTATGTTTCTAGGGATACCCCTTGAAGCAGGAAAGATCTTGTCTGCACTTGCAACATTCCGGATTCTTCAAGAGCCAATATATAACCTTCCTGATACAATTTCTATGATAGCACAAACTAAAGTTTCTCTTGATAGGATTTCATCATTCCTTCGGCTTGATGACTTACCATCTGATGTTGTTGAGAAGCTTCCTCAGGGAAGTTCTAATACAGCAATTGAAGTAATTGATGGAAACTTCTCTTGGGATTTATCTTTCCCTAACCCAACATTGCAAAATATAAACCTTAAAGTTTTTCTTGGGATGAGGGTTGCTGTTTGTGGTGCTGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTGTATTGGGAGAGGTACCTAAGATATCAGGCGATCTTAAGGTTTGCGGAACAAAGGCCTATGTTGCTCAGTCTCCATGGATACAAAGCGGCAAGATAGAGGATAATATTTTGTTTGGTAAACCCATGGATAGGGAAAGGTATGAGAAGGTACTGGAAGCTTGTTCCTTGAAGAAGGACCTGGAGATTTTTTCTTTCGGTGATCAGACAATTATAGGAGAACGTGGAATAAATATGAGTGGTGGACAGAAACAAAGAATTCAAATTGCACGTGCTCTCTACCAAGATGCCGATATATATCTATTTGATGATCCCTTTAGTGCTGTGGATGCTCACACAGGCTCTCATCTGTTTAAGGAATGCTTGCTGGGTCATTTATGTTCAAAAACAGTGGTTTATGTCACTCATCAGGTGGAGTTCTTACCCACCGCTGACCTTATATTGGTCATGAAAGATGGGAGAATTACTCAATGTGGAAAGTATATTGATCTGCTTAATAGTGGTACTGATTTTATGGAACTTGTCGGTGCACACAGAAAAGCTCTATCTACTCTAGATTCATTGGATGGAGTGACAACATCTAATGAAATAAGTACCTTAAAAAAAGAAGAAAATGTCTGTGGCACACATGATTTTAAAGAGAAAGAGATAAGCAAAGATGTGCAAAATGGGGAAACAGACAACAAAACTGAACCAAAAGGTCAGCTTGTTCAAGAAGAAGAAAGGGAGAAAGGTAAAGTTGGGTTTTTAGTCTATTGGAAGTATATCACAACGGCATATGGTGGAGCTATGGTACCTTTCATATTGTTGGCTCAGATTCTTTTTCAAGCTCTTCAAATAGGAAGCAATTATTGGATGGCTTGGGCCACTCCCATCTCAACACATGTGCAACCTCGTGTTGAAGGAATGACTCTTATAGGAGTCTATGTTGGTTTGGCTGTTGCAAGTTCTTTCTGTGTCCTTGTCAGAGCAATGCTTCTTGTCACAACAGGTTATAAGACAGCTACTATACTCTTCAATAAAATGCACTTCTGCGTTTTCCGTGCTCCAATGTTATTTTTTGATTCCACTCCAAGTGGCCGAGTACTTAACAGAGCTTCAACTGACCAAAGTGCAGTGGATACAGACATTCCTTATCAAATTGGCTCACTTGCCTTCTCAATGATCCAGCTTCTGGGAATTATAGCAGTGATGTCCCAGGTTGCATGGCAGGTTTTCATTGTCTTTATACCTGTAATAGCAGTCAGCATATGGTATCAGCAATATTATATACCATCAGCTCGAGAACTATCACGTTTAATTGGAGTCTGCAAAGCTCCAATCATTCAACACTTTGCTGAGACAATTTCTGGTACTTCAACCATCAGAAGCTATGACCAGCAGTCAAGATTTAGAGAGACAAATATGAAACTGACCGATGGGTATTCTCGGCCAAACTTCAATATTGTTGGCGCCATGGAATGGTTGTGCTTCCGCTTAGATATGTTGTCTTCAGTCACATTTGCCTTTTCCTTATTAGTCTTAATATCTATTCCACCGGGAATCATTGATCCAGGCATTGCTGGTTTAGTTGTTACATATGGACTTAATTTGAACATGATACAAGCTTGGGTGATATGGAATCTGTGTAACATAGAGAACAAAATTATATCAGTAGAAAGAATACTTCAATATACTAGTATTCCTAGTGAGCCTCCCCTTGTTGTAGAAGAAACTCGGCCCAACCCTTCTTGGCCATCATATGGCGAGGTTGATATACAAGATTTGCAGGTTCGTTATGCTCCACATCTTCCTCTTGTGTTGCGTGGTCTAACATGTAAGTTTCGTGGAGGATGGAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCCACTCTCATTCAAACACTTTTCCGAATTGTTGAGCCTACCTGTGGTCAGATCATGATTGACAACATCAACATCTCTTCAATTGGACTTCATGATTTGAGGTCTAAACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGAACTGTGAGAAATAATCTAGATCCTCTGGAAGAATACACTGATGAACAAATTTGGGAGGCCCTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTGGACTCCACAGTTAGTGAGAATGGTGAGAATTGGAGTATGGGTCAAAGGCAGTTGGTCTGCCTTGGCAGGGTGCTTCTTAAGAAAAGCAAGGTTTTGGTGCTTGATGAAGCCACTGCATCAGTAGATACAGCTACAGATAATTTGATTCAGCAGACTCTTAGGCAACATTTCTCTGACTCTACAGTCATTACCATTGCACATAGAATAACTTCTGTTGTTGACAGTGATATGGTTCTGCTTCTTAGCCAAGGACTTATTGAGGAGTATGACACCCCAACAACTTTGCTAGAGAACAAGTCCTCATCTTTTGCACAACTTGTTGCAGAGTATACCATGCGGTCCAACTCCAATTTTCAGAAATTTGTGGATCACTGA 4497 0.4092 MNNNVVHFLMHSLLLNPIFLNVLSASLHCLLLLSASLSWLWNKMTFTPGTGEEDSKEKEKPNDRETLFKTTVFCSLGVSAFSFVLCFFNYFYWYTSGWSEQKFMTLLDLALKTLAWGVVCVSLHKGFFVFGSGERRFRFSFIFRVWCALYLVFSCYSFVVDIVVVTKIPTQLLVYDVVSTCAGFLFFYVGYFVKKKGHVNGIDEPLLNDDAKETKGGDNVTPFSHAGVFSILTFAWVGSLVAAGYKKTLNLEDVPLLDNKDSVAGAFPSFRDRLEVDYGANAINSLTTLKLVKSLVMSAWKEILFTAFLALLSALASYVGPYLIEGFVQYLDGQRQYENQGYVLVSAFFFAKIVECLSQRHWFFRLQQIGLRIRALLVVMIYNKALTVSCQSKQGHTSGEIINFMTVDAERVGVFSWYMHDLWMVALQVALALLILYKNLGLASVAALVATIVVMLANVPLGSLQEKFQNKLMESKDIRMKATSEILRNMRILKLQGWEMKFLSKITELRKTEEGWLKSFVYTSAMTTFVFWGAPTFVSVVTFGTCMFLGIPLEAGKILSALATFRILQEPIYNLPDTISMIAQTKVSLDRISSFLRLDDLPSDVVEKLPQGSSNTAIEVIDGNFSWDLSFPNPTLQNINLKVFLGMRVAVCGAVGSGKSTLLSCVLGEVPKISGDLKVCGTKAYVAQSPWIQSGKIEDNILFGKPMDRERYEKVLEACSLKKDLEIFSFGDQTIIGERGINMSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGHLCSKTVVYVTHQVEFLPTADLILVMKDGRITQCGKYIDLLNSGTDFMELVGAHRKALSTLDSLDGVTTSNEISTLKKEENVCGTHDFKEKEISKDVQNGETDNKTEPKGQLVQEEEREKGKVGFLVYWKYITTAYGGAMVPFILLAQILFQALQIGSNYWMAWATPISTHVQPRVEGMTLIGVYVGLAVASSFCVLVRAMLLVTTGYKTATILFNKMHFCVFRAPMLFFDSTPSGRVLNRASTDQSAVDTDIPYQIGSLAFSMIQLLGIIAVMSQVAWQVFIVFIPVIAVSIWYQQYYIPSARELSRLIGVCKAPIIQHFAETISGTSTIRSYDQQSRFRETNMKLTDGYSRPNFNIVGAMEWLCFRLDMLSSVTFAFSLLVLISIPPGIIDPGIAGLVVTYGLNLNMIQAWVIWNLCNIENKIISVERILQYTSIPSEPPLVVEETRPNPSWPSYGEVDIQDLQVRYAPHLPLVLRGLTCKFRGGWKTGIVGRTGSGKSTLIQTLFRIVEPTCGQIMIDNINISSIGLHDLRSKLSIIPQDPTMFEGTVRNNLDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSTVSENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQTLRQHFSDSTVITIAHRITSVVDSDMVLLLSQGLIEEYDTPTTLLENKSSSFAQLVAEYTMRSNSNFQKFVDH* 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01896 1498 FunFam ABC transporter C family member 5 603 850 - -
Phac8g01896 1498 CDD ABCC_MRP_domain1 618 818 - -
Phac8g01896 1498 FunFam ABC transporter C family member 10 287 600 - -
Phac8g01896 1498 SUPERFAMILY ABC transporter transmembrane region 929 1230 IPR036640 GO:0005524|GO:0016020
Phac8g01896 1498 SMART AAA_5 1274 1467 IPR003593 GO:0016887
Phac8g01896 1498 SMART AAA_5 645 818 IPR003593 GO:0016887
Phac8g01896 1498 CDD ABCC_MRP_domain2 1246 1466 - -
Phac8g01896 1498 FunFam ABC transporter C family member 5 892 1229 - -
Phac8g01896 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 618 841 IPR003439 GO:0005524
Phac8g01896 1498 Gene3D - 603 853 IPR027417 -
Phac8g01896 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 931 1211 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g01896 1498 Pfam ABC transporter 636 770 IPR003439 GO:0005524
Phac8g01896 1498 CDD ABC_6TM_ABCC_D2 929 1223 IPR044726 GO:0140359
Phac8g01896 1498 ProSitePatterns ABC transporters family signature. 743 757 IPR017871 GO:0005524|GO:0016887
Phac8g01896 1498 FunFam ABC transporter C family member 3 1231 1483 - -
Phac8g01896 1498 Gene3D ABC transporter type 1, transmembrane domain 281 600 IPR036640 GO:0005524|GO:0016020
Phac8g01896 1498 Gene3D ABC transporter type 1, transmembrane domain 891 1229 IPR036640 GO:0005524|GO:0016020
Phac8g01896 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1240 1479 IPR027417 -
Phac8g01896 1498 SUPERFAMILY ABC transporter transmembrane region 294 604 IPR036640 GO:0005524|GO:0016020
Phac8g01896 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 584 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g01896 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 615 840 IPR027417 -
Phac8g01896 1498 MobiDBLite consensus disorder prediction 881 903 - -
Phac8g01896 1498 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 223 1485 - -
Phac8g01896 1498 Gene3D - 1231 1484 IPR027417 -
Phac8g01896 1498 Pfam ABC transporter transmembrane region 931 1171 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g01896 1498 Pfam ABC transporter transmembrane region 304 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Phac8g01896 1498 CDD ABC_6TM_ABCC_D1 318 592 IPR044746 GO:0140359
Phac8g01896 1498 Pfam ABC transporter 1266 1413 IPR003439 GO:0005524
Phac8g01896 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1248 1482 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01896 Phac-Chr8 18166211 18172271 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01896 628 848 Calmodulin-binding Proteins AT2G36910 30.612 4.90e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01896 - K05666 gmx:100794567 2483.37