Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01818 ATGTCTGTCCCCATGGCAATAGCACTTTCAGGCCAACCTCTCCTAGGTCAACCAGTGATGGTAAAGCCATCAGAAGCAGAAAAGAATTTGGTTCAGTCTACAACAGCTGTTGCTAATGGATCCACTGGACTTATCGGTCCTTATTCTGGGGGAGCAAGAAGGCTCTATGTTGGAAATTTGCATATCAGTATGAGTGAAGCTGATATTCGTAAGGTGTTTGAAGCATTTGGTCAGGTTGAGCTAGTCCAGCTGCCACTTGATGAAAGTGGGCACTGTAAAGGTTTTGGCTTTGTACAGGTGAAATTTACTCACTCTACATAG 321 0.4424 MSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAVANGSTGLIGPYSGGARRLYVGNLHISMSEADIRKVFEAFGQVELVQLPLDESGHCKGFGFVQVKFTHST* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01818 106 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 55 100 IPR000504 GO:0003723
Phac8g01818 106 SUPERFAMILY RNA-binding domain, RBD 51 99 IPR035979 GO:0003676
Phac8g01818 106 PANTHER SPLICING FACTOR (PAD-1), PUTATIVE (AFU_ORTHOLOGUE AFUA_1G15810)-RELATED 1 99 IPR006509 GO:0003723|GO:0005634|GO:0006397
Phac8g01818 106 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 53 106 IPR000504 GO:0003723
Phac8g01818 106 Gene3D - 38 105 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01818 Phac-Chr8 17136962 17137633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01818 55 98 Eukaryotic Initiation Factors Gene Family AT3G16380 45.455 3.79e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01818 K13091 - gmx:100795336 189.119