Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01801 ATGGGTTTCAGAAGCCGTGCAAACATGTTTTTTGTTTTGTTCATACTGAGTTGTTATGTTTTGGATATTGGCACTGCCACAGACACCATCAACTCATCTCAGTTCATCAAGGACAATGAAACTATAACCTCCACTGGTGGCAATTTCACCTTGGGCTTCTTCACCCCTCAAAATTCTACCAATCGTTATGTGGGAATTTGGTGGAAAACCAAATTCCCTATCATATGGGTGGCTAACAGAAACCAACCACTGAATGATTCTTCTGGAGTTGTCACCATATCTGAAGATGGCAATCTTGTGGTGTTGAATGGTCAGAAACAAGTGATTTGGTCAACAAATGTGTCAACCGCATCATCCAATACAAGTGCCAAGCTTTTTGATTCTGGTAAGCTAGTCCTCACTGAAACCACAAGGGGAACCTTCTTGTGGGATAGTTTTGTGCACCCTTCAAATACGTTATTGCCCGGTATGAAAACTTCAACCGATGTAAGCACAGGTACGAAACTAGAACTTACATCATGGAAAAGCCCTTCTAATCCCTCCGTTGGGAGCTTCTCTTCCAGTGTTCTTCGACGCATAAATATACTTGAAGTGTTCATTTGGAATGAAGCTCGACCATACTGGCGCAGTGGTCCATGGAATAGTTGGATCTTTACAGGGATACCCATGTCAGCGCGTTTTTATTCTTTCAAAGCTGGGGATGATGAGGAAGGAAATGCATATTTATATTACACAATATCAAGTTCGCAAAGTTTTTCTATGTATATGTTGACTTCGAGAGGCCAATATAGAGAAATATCGTGGAATGATACGAAGAAAGAGATGGAAACTACATGGAGTAGTCAAGAATCAGATTGTGATGTTTATGGAATATGTGGGTCATTCGCTATTTGTAATGCAGAAAGCTCACCAATATGCAGTTGTTTGAATGGGTTTGAAGCGAAGAACAAAGAAGAATGGAATAGACAAAACTGGACTGGTGGATGTGTTAGGAGCACACCTTTGCAGTGTGAAAGGGTCAGAGATCAAAACGTAAGTGCAACGGACGATGGCTTTTCGAAACTGCAAATGGTTAAAGTTCCTGATTTTCCAGAAGGGTCTCCTGTTGAGACTGATTGTAGAAGCCAATGCTTGGAGAATTGCTCTTGTGTTGCTTATTCTTTTGATGTTGGAATCGGTTGCATGTCTTGGACTGGGATTCTTCTAGACATACAACAATTGCCAAAGGGAGGACTTGATTTATATGTTCGTGTAGCTGACTCTGATCTTGAACATGAAAATGGGACAAACACAGGAATGATCATTGGAATTACAGTGTCAGTAGTAACAGTCATCATAGTTGCTTGTGCATATGTCATGTGGAGGACTTCCAATCACCCAACCAAAATATGGCACTCAATCAAATCAGCAAGGAAGAGGAACATCACAGCTTTCCAACCATTGAACAAAAGAAGTGAAACACCAGAACATCCAAGCCACAAAGTAATAGAAGAACTGTCGCAAGTTAAACTCCAGGAGCTGTTACTATTTGATTTTGATAGGCTTGCAACAGCCACAAACAACTTCCACCTGTCCAACAAACTTGGGCAGGGTGGTTTTGGTTCTGTATACAAGGGGAAACTGCAAGATGGACAGGAAATAGCAGTTAAAAGACTTTCTAGGGCATCTGGACAAGGTCAAGAAGAATTCATGAACGAAGTAGTGGTCATTTCCAAGCTTCAACACCGTAATCTTGTAAGACTTTTTGGCTGCTGTATTGAAGGTGACGAAAAGATGTTGATATATGAATACCTTCCAAATAAAAGCTTGGATGTGTTAATCTTTGATCCATCAAAAAGTAAACTCCTAGATTGGAGGAAGCGCTGTAGCATAATAGAAGGAATAGCTCGAGGATTGCTATATCTTCACAGGGACTCCAGACTAAGAATCATACACAGAGATTTGAAGACAAGTAATATATTGTTAGATGAAGAACTAAATCCCAAAATATCAGACTTTGGTATGGCAAGAATATTTGGAGGGAGTGAAGATGAGGCCAACACTAACAGAATTGTTGGAACATATGGCTATATGTCCCCTGAATACGCAATGCAAGGACTATTTTCAGAGAAATCAGATGTCTTTAGCTTTGGTGTTTTGGCACTAGAGATTGTAAGTGGAAGAAGAAATTCAAGCTTTCATGATGATGAACATGTTCTCAGCCTCTTGGGATTTGCCTGGAAACAGTGGAGGGAAGGAAATGTATCTTCTTTAATAGATCCAGAAGTATATAATCCTAGTCATAATAAAGATATTTTAAGGTGCATTCACATAGCTCTTCTATGTGTACAAGAACTTGCTATAGACCGACCCACTATGGCTGTAGTAATTTCTATGCTTACCAGTGAGGCTGCGTTTCTTCCACCTCCATGTCCACCTGCATTTATCCTGAGGCATAATTTGCTGAATTCGGTGCCATCGAAACGAAGTCAGAGATTTTCCTCCACAAATACTGTTAGCATTTCAACTATCAGTGGAAGATAG 2523 0.4031 MGFRSRANMFFVLFILSCYVLDIGTATDTINSSQFIKDNETITSTGGNFTLGFFTPQNSTNRYVGIWWKTKFPIIWVANRNQPLNDSSGVVTISEDGNLVVLNGQKQVIWSTNVSTASSNTSAKLFDSGKLVLTETTRGTFLWDSFVHPSNTLLPGMKTSTDVSTGTKLELTSWKSPSNPSVGSFSSSVLRRINILEVFIWNEARPYWRSGPWNSWIFTGIPMSARFYSFKAGDDEEGNAYLYYTISSSQSFSMYMLTSRGQYREISWNDTKKEMETTWSSQESDCDVYGICGSFAICNAESSPICSCLNGFEAKNKEEWNRQNWTGGCVRSTPLQCERVRDQNVSATDDGFSKLQMVKVPDFPEGSPVETDCRSQCLENCSCVAYSFDVGIGCMSWTGILLDIQQLPKGGLDLYVRVADSDLEHENGTNTGMIIGITVSVVTVIIVACAYVMWRTSNHPTKIWHSIKSARKRNITAFQPLNKRSETPEHPSHKVIEELSQVKLQELLLFDFDRLATATNNFHLSNKLGQGGFGSVYKGKLQDGQEIAVKRLSRASGQGQEEFMNEVVVISKLQHRNLVRLFGCCIEGDEKMLIYEYLPNKSLDVLIFDPSKSKLLDWRKRCSIIEGIARGLLYLHRDSRLRIIHRDLKTSNILLDEELNPKISDFGMARIFGGSEDEANTNRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLALEIVSGRRNSSFHDDEHVLSLLGFAWKQWREGNVSSLIDPEVYNPSHNKDILRCIHIALLCVQELAIDRPTMAVVISMLTSEAAFLPPPCPPAFILRHNLLNSVPSKRSQRFSSTNTVSISTISGR* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01801 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 180 IPR036426 -
Phac8g01801 840 PIRSF SRK 3 840 IPR024171 GO:0004674
Phac8g01801 840 CDD PAN_AP_plant 333 419 - -
Phac8g01801 840 Pfam S-locus glycoprotein domain 208 315 IPR000858 GO:0048544
Phac8g01801 840 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Phac8g01801 840 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 784 - -
Phac8g01801 840 ProSiteProfiles PAN/Apple domain profile. 337 419 IPR003609 -
Phac8g01801 840 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Phac8g01801 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 801 - -
Phac8g01801 840 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Phac8g01801 840 Pfam Protein tyrosine and serine/threonine kinase 523 791 IPR001245 GO:0004672|GO:0006468
Phac8g01801 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 487 597 - -
Phac8g01801 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Phac8g01801 840 Pfam D-mannose binding lectin 74 175 IPR001480 -
Phac8g01801 840 Pfam PAN-like domain 348 404 IPR003609 -
Phac8g01801 840 CDD B_lectin 33 149 IPR001480 -
Phac8g01801 840 Gene3D Transferase(Phosphotransferase) domain 1 598 798 - -
Phac8g01801 840 SMART ntp_6 347 418 IPR003609 -
Phac8g01801 840 SUPERFAMILY Protein kinase-like (PK-like) 507 825 IPR011009 -
Phac8g01801 840 SMART serkin_6 522 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01801 840 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 146 - -
Phac8g01801 840 SMART blect_4 33 149 IPR001480 -
Phac8g01801 840 CDD STKc_IRAK 528 794 - -
Phac8g01801 840 Gene3D Phosphorylase Kinase; domain 1 483 597 - -
Phac8g01801 840 ProSiteProfiles Protein kinase domain profile. 522 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01801 840 Gene3D - 22 147 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01801 Phac-Chr8 16780272 16783975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01801 496 810 Receptor kinase-like Gene Family AT4G11530 57.595 1.86e-123 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac8g01801 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01801 - - var:108327403 1397.1