Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01800 ATGAAAGATCTGATAGTGAAGCCTGTTTATTCTATTCACTTTTGTATTCATCAAGGGAAACTGAATGAAAGATGTGATAACATTTGCATGGCACAAACCGTTGACTTCAAAAGGACACTGTCAAATCTTACAGAGGCCATTTGGTTCATAGTAATGGATTTCAGAAGCCGTGCAAACAACATGTTCGTTGTTTTGTTCATACTGTGTTGTTGTGTTTTGGATTTTGGTACTGCCACAGACACCATCAACTCATCTCAGTTCATCAAGGACAATGAAACTATAACCTCCACTGGTGGCAACTTAACCTTGGGCTTCTTCACCCCTCAAAATTCTACCAATCGTTATGTGGGAGTTTGGTGGAAAACCAAATTCCCTATCGTATGGGTGGCTAACAGAAACCAACCACTGAATGATTCTTCTGGAGTTGTCACCATATCTGAAGATGGCAATCTTGTGGTGTTGAATGGTCAGAATCAAGTGATTTGGTCAACAAATGTGTCAACGACATCATCCAATACAAGTGCCCAGCTTTTAGATTCTGGTAAGCTAGTCCTCACTGAAACCACAAGGGGAACCATCTTGTGGGATAGTTTTGAGCACCCTTCAAATACGTTATTGCCCGGTATGAAAACTTCAACCAATGTAAGAACAGGTACGAAAGTAGAAATTACATCTTGGAAAAGCCCTTCTAATCCCTCCGTTGGGAGCTTCTCTTCCAGTGTTTTTCGACGCATAAATATAATTGAAATGTTCATTTGGAATGAAACTCGACCATACTGGCGCAGTGGTCCATGGAATGGTGGGATCTTTACTGGGATACCCATGTCATCGTTTCTTTATTCTTTCAAAGCTGGGGATGATGAGGAAGGAAATACATATTTCTATTACACAGTACCAAGTCCGCAACAAATTTTTATGTATATGTTGAATTCGCGAGGCCAATATAACCAAATATCGTGGAATGATAAGAAGAAGGAGATGGAAATTACATGGAGTAGTCAAGAATCAGATTGTGATGTTTATGGAATATGTGGGTCATTCGCTATTTGTAATGCAGAAAGCTCACCAATATGCAGTTGTTTGAAAGGGTTTGAGCCGAGGAAGAAAGAAGAATGGAATAGACAAAACTGGACTAGTGGATGTGTTAGGAGCACACCTTTGCAGTGTGAAAGGGTCAGAGATCAAAACGTAAGTGCAAAGGAAGATGGCTTTTCGAAACTGCAAATGGTTAAAGTTCCCGATTTTCCAGAAGGGATTATTGTTGACACTGAATGCAGAAGCCAATGCTTGGAGAATTGCTCTTGTGTTGCTTATTCTTTTGATGTTGGAATCGGTTGCATGTCTTGGACTGGGAATCTTCTAGACATACAACAATTGCCAGAGGGAGGACTTGATTTATATGTGCGTGTAGCTGACTCTGATCTTGAGCATGATAAAGGGACAAACACAGCAATGATCATTGGAATTACAGTGTCAGTAGTAACAGTCATCATAGTTACTTCTGCATATGTCATGTGGAGGACTTCCAATCACCCAGCCAAAATATGGCACTCAATCAAATCAGCAAGGAAAAGGAACATCACAGCTTTTCAACTATTGAACAAAAAAGGTGAAACACCAGAACATCCAAGCCACAAAGTAATAGAAGAACTGTCACAAGTTAAACTCCAGGAGCTGTTACTATTTGATTTTGAAAGGCTTGCAACAGCCACAAACAACTTCCACCTGTCTAACAAACTTGGGCAGGGTGGTTTTGGACCTGTGTACAAGGGGAAACTGCAAGATGGACAGGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGGCAAGGTCAAGAAGAATTCATGAACGAAGTAGTGGTCATTTCCAAGCTTCAACACCGTAATCTTGTAAGACTTTTTGGCTGCTGTATTGAAGGTGACGAAAAGATGTTGATATATGAGTACTTGCCAAATAAAAGCTTGGATGTGTTAATCTTTGATCCATCAAAAAGTAAACTCCTAGATTGGAGGAAGCGCTGTAGCATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTACACAGGGACTCCAGATTAAGAATCATACACAGAGATTTGAAGACAAGTAATATATTGTTAGATGAAGAACTAAATCCAAAAATATCAGACTTTGGTATGGCAAGAATATTTGGAGGGAAAGAAGATCAGGCCAACACTAACAGAGTTGTTGGAACATATGGCTATATGTCCCCTGAATATGCAATGCAAGGACTATTTTCAGAGAAATCAGATGTCTTTAGCTTTGGTGTTTTGGCACTAGAGATTGTAAGTGGAAGAAGAAATTCAAGCTTTCATGATGATGAACATGTTCTTAGCCTCTTGGGATTTGCCTGGATGCAGTGGCGGGAAGGAAATATATCTTCTTTAATAGATCCAGAAGTGTATGATCCTAGTCATCATAATAAAGATATTTTTAGGTTCATTCACATAGCACTTCTCTGTGTGCAAGAACTCGCTATAGACCGACCCACTATGGCTGCAGTAATTTCTATGCTTAACAGTGAGGTTGCATTTCTTCCACCTCCAAATCAACCTGCATTCATCCTGAGGCATAATTTGCTGAGTTCAGGGTCTAAAGGAAGTCATAGATTTTCCTCCACCAATACTGTTAGCATTACAAGTATCAGTGGAAGATAG 2679 0.3979 MKDLIVKPVYSIHFCIHQGKLNERCDNICMAQTVDFKRTLSNLTEAIWFIVMDFRSRANNMFVVLFILCCCVLDFGTATDTINSSQFIKDNETITSTGGNLTLGFFTPQNSTNRYVGVWWKTKFPIVWVANRNQPLNDSSGVVTISEDGNLVVLNGQNQVIWSTNVSTTSSNTSAQLLDSGKLVLTETTRGTILWDSFEHPSNTLLPGMKTSTNVRTGTKVEITSWKSPSNPSVGSFSSSVFRRINIIEMFIWNETRPYWRSGPWNGGIFTGIPMSSFLYSFKAGDDEEGNTYFYYTVPSPQQIFMYMLNSRGQYNQISWNDKKKEMEITWSSQESDCDVYGICGSFAICNAESSPICSCLKGFEPRKKEEWNRQNWTSGCVRSTPLQCERVRDQNVSAKEDGFSKLQMVKVPDFPEGIIVDTECRSQCLENCSCVAYSFDVGIGCMSWTGNLLDIQQLPEGGLDLYVRVADSDLEHDKGTNTAMIIGITVSVVTVIIVTSAYVMWRTSNHPAKIWHSIKSARKRNITAFQLLNKKGETPEHPSHKVIEELSQVKLQELLLFDFERLATATNNFHLSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRASGQGQEEFMNEVVVISKLQHRNLVRLFGCCIEGDEKMLIYEYLPNKSLDVLIFDPSKSKLLDWRKRCSIIEGIARGLLYLHRDSRLRIIHRDLKTSNILLDEELNPKISDFGMARIFGGKEDQANTNRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLALEIVSGRRNSSFHDDEHVLSLLGFAWMQWREGNISSLIDPEVYDPSHHNKDIFRFIHIALLCVQELAIDRPTMAAVISMLNSEVAFLPPPNQPAFILRHNLLSSGSKGSHRFSSTNTVSITSISGR* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01800 892 ProSiteProfiles PAN/Apple domain profile. 389 471 IPR003609 -
Phac8g01800 892 CDD STKc_IRAK 580 847 - -
Phac8g01800 892 SUPERFAMILY Protein kinase-like (PK-like) 557 846 IPR011009 -
Phac8g01800 892 Pfam D-mannose binding lectin 126 227 IPR001480 -
Phac8g01800 892 Gene3D - 75 198 IPR036426 -
Phac8g01800 892 Pfam PAN-like domain 399 456 IPR003609 -
Phac8g01800 892 CDD PAN_AP_plant 385 471 - -
Phac8g01800 892 PIRSF SRK 52 892 IPR024171 GO:0004674
Phac8g01800 892 Gene3D Phosphorylase Kinase; domain 1 537 649 - -
Phac8g01800 892 CDD B_lectin 85 201 IPR001480 -
Phac8g01800 892 MobiDBLite consensus disorder prediction 872 892 - -
Phac8g01800 892 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 75 198 - -
Phac8g01800 892 ProSiteProfiles Protein kinase domain profile. 574 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01800 892 ProSiteProfiles Bulb-type lectin domain profile. 79 198 IPR001480 -
Phac8g01800 892 SMART serkin_6 574 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01800 892 SMART blect_4 85 201 IPR001480 -
Phac8g01800 892 Pfam S-locus glycoprotein domain 260 367 IPR000858 GO:0048544
Phac8g01800 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Phac8g01800 892 Pfam Protein tyrosine and serine/threonine kinase 575 844 IPR001245 GO:0004672|GO:0006468
Phac8g01800 892 FunFam receptor-like serine/threonine-protein kinase SD1-8 546 649 - -
Phac8g01800 892 SUPERFAMILY alpha-D-mannose-specific plant lectins 117 232 IPR036426 -
Phac8g01800 892 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 650 854 - -
Phac8g01800 892 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 65 837 - -
Phac8g01800 892 SMART ntp_6 399 470 IPR003609 -
Phac8g01800 892 Gene3D Transferase(Phosphotransferase) domain 1 650 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01800 Phac-Chr8 16771727 16775474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01800 548 863 Receptor kinase-like Gene Family AT4G11530 57.413 3.38e-121 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phac8g01800 PK_Tyr_Ser-Thr 3.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01800 - - var:108327403 1451.42