Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01703 ATGCTCTTCTACATTTACATCTTTTGTTATTTTATAACTGATTTCTTATATTATGTAATTCAGATTATAAGGAATGCTGATCTTGAAGAACTTACAGAGTTAGGTTCTGGTACTTATGGAACTGTTTATCATGGAAAATGGCGGGGAACTGACATTGCTATAAAGAGAATTAAAAAGAGTTGCTTTGCAGGAAGGTCTTCCGAACAAGAACGCTTGGCAAAAGATTTTTGGAGAGAGGCTCAGATCCTTTCAAATCTTCACCATCCCAATGTGGTTGCATTTTATGGAATAGTACCGGATGGGGCTGGAGGAACTTTAGCAACTGTAACAGAATACATGGTTAATGGTTCCCTTAGGCACGTCCTTGTAAAGAACAATAGATTACTTGATCGCCGTAAAAAGCTAATAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCACTCAAAAAATATTGTCCATTTTGATTTGAAATGTGACAATTTGCTTGTCAATCTAAGGGACCCACAACGACCAATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTGGTATCTGGAGGTGTGCGAGGAACCCTTCCATGGATGGCACCAGAGCTATTGAATGGGAATAGCAGTCGGGTTTCTGAGAAGGTTGACGTTTTCTCATTTGGCATCTCAATGTGGGAGTTATTAACAGGAGAGGAACCTTATGCAGATATGCATTGTGGCGCCATTATTGGGGGTATTGTAAAGAACACTCTTAGACCTCCTGTGCCTGATCGATGCGATTCTGAATGGAGAAAGCTTATGGAAGAGTGTTGGTCACCTGAGCCCGAAAACAGGCCATCATTCACAGAGATAACCAGCAGGTTAAGATCTATGTCTGTAGTCCTTCAACCAAAAGGAAATGGTCAGGCATATCAGTTAAGACCCTCCTGA 939 0.4047 MLFYIYIFCYFITDFLYYVIQIIRNADLEELTELGSGTYGTVYHGKWRGTDIAIKRIKKSCFAGRSSEQERLAKDFWREAQILSNLHHPNVVAFYGIVPDGAGGTLATVTEYMVNGSLRHVLVKNNRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPVPDRCDSEWRKLMEECWSPEPENRPSFTEITSRLRSMSVVLQPKGNGQAYQLRPS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01703 312 SMART serkin_6 28 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01703 312 PRINTS Tyrosine kinase catalytic domain signature 110 123 IPR001245 GO:0004672|GO:0006468
Phac8g01703 312 PRINTS Tyrosine kinase catalytic domain signature 262 284 IPR001245 GO:0004672|GO:0006468
Phac8g01703 312 PRINTS Tyrosine kinase catalytic domain signature 147 165 IPR001245 GO:0004672|GO:0006468
Phac8g01703 312 PRINTS Tyrosine kinase catalytic domain signature 218 240 IPR001245 GO:0004672|GO:0006468
Phac8g01703 312 PANTHER SERINE-THREONINE PROTEIN KINASE 24 293 - -
Phac8g01703 312 ProSitePatterns Protein kinases ATP-binding region signature. 34 59 IPR017441 GO:0005524
Phac8g01703 312 SUPERFAMILY Protein kinase-like (PK-like) 10 290 IPR011009 -
Phac8g01703 312 PIRSF ILK 15 307 - -
Phac8g01703 312 Gene3D Transferase(Phosphotransferase) domain 1 116 307 - -
Phac8g01703 312 Pfam Protein tyrosine and serine/threonine kinase 30 291 IPR001245 GO:0004672|GO:0006468
Phac8g01703 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Phac8g01703 312 ProSiteProfiles Protein kinase domain profile. 28 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01703 312 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 21 115 - -
Phac8g01703 312 CDD STKc_MAP3K-like 34 291 - -
Phac8g01703 312 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 116 307 - -
Phac8g01703 312 Gene3D Phosphorylase Kinase; domain 1 21 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01703 Phac-Chr8 15611329 15618062 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01703 12 297 MAP Kinase Kinase Kinase AT1G16270 80.070 1.51e-167 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Phac8g01703 PK_Tyr_Ser-Thr 6.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01703 - - pvu:PHAVU_008G122700g 602.438