Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01700 ATGGTGGTCATAGAGCAGGAAGAGAGTGAGCACCGAAATGCGAGCCCCTCCAACGCCGCCGGCGCTGCCAACGACGCTTCCGACGGCTTCGAAACCGCCAGCGAGGCCGATCTCGGCAGTGATGATGACAACGGAGATGGCGGAGCAGACAGACAAGAGGAGAAGAATCACCCCGAGAAACATCACCAGCAACAGCAGACTGAGCAGCAACCTGAACACGATCAGAGCTCTACCGAATCCTCTGAGAATGCCTTAATCACCGAAGAGTCCTCCGAGAATGCCTTGATCAAAGAAGAAGAATCGAGACAGAAAGCATTGGATCAAGCAAATGAAGCAAAGGTAGAAGGGAACAAGCTTTTTGTAGATGGGAAGTATGAAGAGGCGTTATCACAGTATGAAGTTGCTTTACAAGTAGCACCAGACACACCTTCATCTGTGGAAATACGGTCAATATGCCATTCGAACCGTGGTGTGTGCTTTCTGAAACTGGGAAAATATGATAACACAATTAAGGAATGCACGAAAGCATTAGAACTGAATCCTGTGTACGTGAAGGCTTTTGTGAGAAGAGGAGAAGCTCATGAAAAGCTCGAGCATTTTGAAGAGGCCATTGCTGATATGAAAAAGATCTTAGAAATTGACCCCTCAAATGATCAAGCTAGGAAAACTATCCGGCGCCTAGAGCCCCTTGCTGCAGAAAAACGGGAAAAGATGAAAGAGGAAATGATTGGAAAACTGAAAGATATGGGCAATTCTGTCCTGGGCCGCTTTGGGATGAGTGTAGACAACTTTAAAGCAGTCAAAGATCCAAACACTGGTTCCTATTCTATCTCATTCCAACGCTAA 846 0.4669 MVVIEQEESEHRNASPSNAAGAANDASDGFETASEADLGSDDDNGDGGADRQEEKNHPEKHHQQQQTEQQPEHDQSSTESSENALITEESSENALIKEEESRQKALDQANEAKVEGNKLFVDGKYEEALSQYEVALQVAPDTPSSVEIRSICHSNRGVCFLKLGKYDNTIKECTKALELNPVYVKAFVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARKTIRRLEPLAAEKREKMKEEMIGKLKDMGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQR* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01700 281 MobiDBLite consensus disorder prediction 69 90 - -
Phac8g01700 281 ProSiteProfiles TPR repeat profile. 150 183 IPR019734 GO:0005515
Phac8g01700 281 MobiDBLite consensus disorder prediction 1 111 - -
Phac8g01700 281 Gene3D Tetratricopeptide repeat domain 48 245 IPR011990 GO:0005515
Phac8g01700 281 SUPERFAMILY TPR-like 105 227 IPR011990 GO:0005515
Phac8g01700 281 ProSiteProfiles TPR repeat profile. 184 217 IPR019734 GO:0005515
Phac8g01700 281 Pfam Tetratricopeptide repeat 185 217 IPR013105 -
Phac8g01700 281 SMART tpr_5 150 183 IPR019734 GO:0005515
Phac8g01700 281 SMART tpr_5 184 217 IPR019734 GO:0005515
Phac8g01700 281 SMART tpr_5 109 142 IPR019734 GO:0005515
Phac8g01700 281 Coils Coil 95 115 - -
Phac8g01700 281 MobiDBLite consensus disorder prediction 44 68 - -
Phac8g01700 281 ProSiteProfiles TPR repeat profile. 109 142 IPR019734 GO:0005515
Phac8g01700 281 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 3 281 - -
Phac8g01700 281 Pfam Tetratricopeptide repeat 152 181 IPR001440 GO:0005515
Phac8g01700 281 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01700 Phac-Chr8 15545398 15553538 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01700 71 240 Calmodulin-binding Proteins AT3G25230 35.450 1.54e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01700 K24926 - gmx:100808386 403.29