Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01687 ATGGAGTGTGAAGTGAAGTTACAAGGGGGAGATCTGCATGCAGAGGTGGTAACTGAAACAAACCCGGTTGGTTTTGACGCCATGGAAGATGAACAAACTTTGTCGGTTGCTGAGAGAGAGATGTGGCTGAATAGTGACCAAGATGAGTTTCTGGGTGTCAATGAGGCTTCCATGTTCTACGCCGATTTCCCTCCTCTCCCTGATTTCCCTTGCATGTCGTCATCGTCGTCTTCATCTTCTGCACCACCACTTCCTCTGAAAACTACATGTTCCACCACAACCACAGCGACCACCGCCACTTCCTCTTCTTCCTCTTCCTCTTCATGGGCCGTCTTGAAGTCAGATGTTGAGGAAGATGTGGAGAAAAACCATTGCAACGGCTCCATGCAAGACCAATTTGATGCAACAGCTTTGTCTTCCACTGCTTCCATGGAGATTTCCCAACAGCAGAACCCTGATCCCGGACTTGGTGGCTCTGTTGGAGAGTGCATGGAGGATGTTATGGATACTTTTGGGTACATGGAGCTTTTGGAGGCCAATGATTTCTTCGATCCTGCCTCAATCTTTCAGAATGAGGAAAGCGAAGACCCTTTAATAGAATTTGGCGTTCTGGAGGAGCAGGTGTCACTGCAAGAGGAGCAACATGAAATGGTGCATCAGAAAGAGAACACTGAAGAGGATCGCAAGGTTCCAGTGTGTGAAGTTATCAAAGGAGAGGAAGAAGGTGGTGGTGGGGGTGGTGGTGGTGGTGGTGGTGTAGTAGATGATGAAATGAGTAATGTCTTCTTGGAGTGGCTCAAGTCTAACAAAGACAGTGTTTCGGCTAATGACTTGAGGAATGTGAAGCTCAAGAAGGCAACGATTGAAAGCGCAGCAAAGCGTTTAGGGGGAGGAAAAGAAGCTATGAAACAGTTGCTTAAGCTGATTCTTGAGTGGGTTCAAACCAGCCATCTTCAGAATAAACGGCGCAAGGAGAATGGTGGCAACAGTAACAATGCTCTTCAGGCACAGTTTCAGGATCCCAGTGGCCAGAACAAGGAGAACGCGAACACGAGTGGCTCATTTGCACCTGAATCGAACTCGTGTTTCAACAACCAGACACCCTGGTTGAATCCTCAAACTTTTGGGACAGATCAAGCCCCTGTTATGGTTCCATCACAGCCGTATTCACAACCCGTGGTTGGGTATGTGGGTGACCCTTACACTAGTGGTTCTGCTCCAAATAACATCACGGTCAATCATAACCATAACAACAACCCTTACCAACCAGGCACGGACCAATACCACATGTTGGAGTCAGCACATTCATGGCCTCATTCTCAGTTCAACGTTGCTTCTCATTATAGCCAGTCTTATGGGGAAAACGGTCTTTTCACACATGGGGGTTTTGGCGGCTATGCCAATAACCAGTACCCTTATCAGTTTTTTCATGGTCCTGGTGATAGGTTGATGAGGTTAGGCCCCTCTGCAACCAAGGAAGCAAGGAAGAAGAGAATGGCGAGGCAGAGAAGGTTTTTATCTCATCACAGGAATCACAATGGCAATCACCACCAGAATCAAGGGTCCGACCCACATGCAAGACTGGGAAATGATAATTGCACCACTGGTTTGGTTGCACCTCATCAGCCAAATTCTGCAGCAGCCAATTGGATGTACTGGCAGGCTATGACGGGTGGCCAGGCTGGTCCTTTGGCTCCGGTGGTTCCCGCCGATCCACTGGCCGGACAAACGGTGGTGGACCGAACCACCATGCACACACAGAATTCTCATCAGAACCGAGCTGCATCCGATAGGAGACAGGGTTGGAAGCCTGAGAAGAACTTGAGATTCCTTCTGCAAAAGGTTTTGAAGCAAAGTGATGTGGGAAGCTTGGGAAGAATAGTTTTGCCAAAAAAAGAAGCAGAAACCCATTTGCCAGAGCTGGAGGCAAGAGATGGAATTTCCATAACAATGGAAGACATTGGAACTTCACGTGTTTGGAACATGCGCTATAGCACCAGATACTGGCCAAACAACAAAAGCAGAATGTATCTGCTCGAGAACACTGGTGATTTTGTGAGAGCCAATGGACTCCAAGAAGGAGATTTCATAGTCATATACTCAGATGTGAAGTGTGGCAAATATATGATAAGAGGAGTGAAAGTGAGGCAACAAGGTGTGAAACCAGAGACCAAAAAAGCAGGGAAAACGCAGAAAAACCAGCATGGGACTAATGCATCAAATACAGCTGGAACTGCTGCTAATAATGGCAGGTCATCGCCACCGAAACCAAAAGCTGAAAAAAAAGTAGCAAATTAG 2298 0.4735 MECEVKLQGGDLHAEVVTETNPVGFDAMEDEQTLSVAEREMWLNSDQDEFLGVNEASMFYADFPPLPDFPCMSSSSSSSSAPPLPLKTTCSTTTTATTATSSSSSSSSWAVLKSDVEEDVEKNHCNGSMQDQFDATALSSTASMEISQQQNPDPGLGGSVGECMEDVMDTFGYMELLEANDFFDPASIFQNEESEDPLIEFGVLEEQVSLQEEQHEMVHQKENTEEDRKVPVCEVIKGEEEGGGGGGGGGGGVVDDEMSNVFLEWLKSNKDSVSANDLRNVKLKKATIESAAKRLGGGKEAMKQLLKLILEWVQTSHLQNKRRKENGGNSNNALQAQFQDPSGQNKENANTSGSFAPESNSCFNNQTPWLNPQTFGTDQAPVMVPSQPYSQPVVGYVGDPYTSGSAPNNITVNHNHNNNPYQPGTDQYHMLESAHSWPHSQFNVASHYSQSYGENGLFTHGGFGGYANNQYPYQFFHGPGDRLMRLGPSATKEARKKRMARQRRFLSHHRNHNGNHHQNQGSDPHARLGNDNCTTGLVAPHQPNSAAANWMYWQAMTGGQAGPLAPVVPADPLAGQTVVDRTTMHTQNSHQNRAASDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYSTRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQQGVKPETKKAGKTQKNQHGTNASNTAGTAANNGRSSPPKPKAEKKVAN* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01687 765 FunFam B3 domain-containing transcription factor FUS3 608 725 - -
Phac8g01687 765 MobiDBLite consensus disorder prediction 72 110 - -
Phac8g01687 765 MobiDBLite consensus disorder prediction 321 370 - -
Phac8g01687 765 ProSiteProfiles B3 DNA-binding domain profile. 612 716 IPR003340 GO:0003677
Phac8g01687 765 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 264 731 IPR044800 GO:0003700
Phac8g01687 765 SMART B3_2 612 716 IPR003340 GO:0003677
Phac8g01687 765 Gene3D - 608 729 IPR015300 -
Phac8g01687 765 MobiDBLite consensus disorder prediction 517 535 - -
Phac8g01687 765 MobiDBLite consensus disorder prediction 731 752 - -
Phac8g01687 765 SUPERFAMILY DNA-binding pseudobarrel domain 611 709 IPR015300 -
Phac8g01687 765 CDD BfiI_C_EcoRII_N_B3 610 713 - -
Phac8g01687 765 MobiDBLite consensus disorder prediction 509 535 - -
Phac8g01687 765 Pfam B3 DNA binding domain 613 711 IPR003340 GO:0003677
Phac8g01687 765 MobiDBLite consensus disorder prediction 718 765 - -
Phac8g01687 765 MobiDBLite consensus disorder prediction 325 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01687 Phac-Chr8 15302509 15306986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01687 39 747 B3 DNA Binding Superfamily AT3G24650 46.265 8.71e-161 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac8g01687 B3 7.8e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01687 K09287 - gmx:100795226 1168.3