Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01686 ATGGAGTGTGAAGTGAAGTTACAAGGGGGAGATCTGCATGCAGAGGTGGTAACTGAAACAAACCCGGTTGGTTTTGACGCCATGGAAGATGAACAAACTTTGTCGGTTGCTGAGAGAGAGATGTGGCTGAATAGTGACCAAGATGAGTTTCTGGGTGTCAATGAGGCTTCCATGTTCTACGCCGATTTCCCTCCTCTCCCTGATTTCCCTTGCATGTCGTCATCGTCGTCTTCATCTTCTGCACCACCACTTCCTCTGAAAACTACATGTTCCACCACAACCACAGCGACCACCGCCACTTCCTCTTCTTCCTCTTCCTCTTCATGGGCCGTCTTGAAGTCAGATGTTGAGGAAGATGTGGAGAAAAACCATTGCAACGGCTCCATGCAAGACCAATTTGATGCAACAGCTTTGTCTTCCACTGCTTCCATGGAGATTTCCCAACAGCAGAACCCTGATCCCGGACTTGGTGGCTCTGTTGGAGAGTGCATGGAGGATGTTATGGATACTTTTGGGTACATGGAGCTTTTGGAGGCCAATGATTTCTTCGATCCTGCCTCAATCTTTCAGAATGAGGAAAGCGAAGACCCTTTAATAGAATTTGGCGTTCTGGAGGAGCAGGTGTCACTGCAAGAGGAGCAACATGAAATGGTGCATCAGAAAGAGAACACTGAAGAGGATCGCAAGGTTCCAGTGTGTGAAGTTATCAAAGGAGAGGAAGAAGGTGGTGGTGGGGGTGGTGGTGGTGGTGGTGGTGTAGTAGATGATGAAATGAGTAATGTCTTCTTGGAGTGGCTCAAGTCTAACAAAGACAGTGTTTCGGCTAATGACTTGAGGAATGTGAAGCTCAAGAAGGCAACGATTGAAAGCGCAGCAAAGCGTTTAGGGGGAGGAAAAGAAGCTATGAAACAGTTGCTTAAGCTGATTCTTGAGTGGGTTCAAACCAGCCATCTTCAGAATAAACGGCGCAAGGAGAATGGTGGCAACAGTAACAATGCTCTTCAGGCACAGTTTCAGGATCCCAGTGGCCAGAACAAGGAGAACGCGAACACGAGTGGCTCATTTGCACCTGAATCGAACTCGTGTTTCAACAACCAGACACCCTGGTTGAATCCTCAAACTTTTGGGACAGATCAAGCCCCTGTTATGGTTCCATCACAGCCGTATTCACAACCCGTGGTTGGGTATGTGGGTGACCCTTACACTAGTGGTTCTGCTCCAAATAACATCACGGTCAATCATAACCATAACAACAACCCTTACCAACCAGGCACGGACCAATACCACATGTTGGAGTCAGCACATTCATGGCCTCATTCTCAGTTCAACGTTGCTTCTCATTATAGCCAGTCTTATGGGGAAAACGGTCTTTTCACACATGGGGGTTTTGGCGGCTATGCCAATAACCAGTACCCTTATCAGTTTTTTCATGGTCCTGGTGATAGGTTGATGAGGTTAGGCCCCTCTGCAACCAAGGAAGCAAGGAAGAAGAGAATGGCGAGGCAGAGAAGGTTTTTATCTCATCACAGGAATCACAATGGCAATCACCACCAGAATCAAGGGTCCGACCCACATGCAAGACTGGGAAATGATAATTGCACCACTGGTTTGGTTGCACCTCATCAGCCAAATTCTGCAGCAGCCAATTGGATGTACTGGCAGGCTATGACGGGTGGCCAGGCTGGTCCTTTGGCTCCGGTGGTTCCCGCCGATCCACTGGCCGGACAAACGGTGGTGGACCGAACCACCATGCACACACAGAATTCTCATCAGAACCGAGCTGCATCCGATAGGAGACAGGGTTGGAAGCCTGAGAAGAACTTGAGATTCCTTCTGCAAAAGGTTTTGAAGCAAAGTGATGTGGGAAGCTTGGGAAGAATAGTTTTGCCAAAAAAAGAAGCAGAAACCCATTTGCCAGAGCTGGAGGCAAGAGATGGAATTTCCATAACAATGGAAGACATTGGAACTTCACGTGTTTGGAACATGCGCTATAGATACTGGCCAAACAACAAAAGCAGAATGTATCTGCTCGAGAACACTGGTGATTTTGTGAGAGCCAATGGACTCCAAGAAGGAGATTTCATAGTCATATACTCAGATGTGAAGTGTGGCAAATATATGATAAGAGGAGTGAAAGTGAGGCAACAAGGTGTGAAACCAGAGACCAAAAAAGCAGGGAAAACGCAGAAAAACCAGCATGGGACTAATGCATCAAATACAGCTGGAACTGCTGCTAATAATGGCAGGTCATCGCCACCGAAACCAAAAGCTGAAAAAAAAGTAGCAAATTAG 2292 0.4729 MECEVKLQGGDLHAEVVTETNPVGFDAMEDEQTLSVAEREMWLNSDQDEFLGVNEASMFYADFPPLPDFPCMSSSSSSSSAPPLPLKTTCSTTTTATTATSSSSSSSSWAVLKSDVEEDVEKNHCNGSMQDQFDATALSSTASMEISQQQNPDPGLGGSVGECMEDVMDTFGYMELLEANDFFDPASIFQNEESEDPLIEFGVLEEQVSLQEEQHEMVHQKENTEEDRKVPVCEVIKGEEEGGGGGGGGGGGVVDDEMSNVFLEWLKSNKDSVSANDLRNVKLKKATIESAAKRLGGGKEAMKQLLKLILEWVQTSHLQNKRRKENGGNSNNALQAQFQDPSGQNKENANTSGSFAPESNSCFNNQTPWLNPQTFGTDQAPVMVPSQPYSQPVVGYVGDPYTSGSAPNNITVNHNHNNNPYQPGTDQYHMLESAHSWPHSQFNVASHYSQSYGENGLFTHGGFGGYANNQYPYQFFHGPGDRLMRLGPSATKEARKKRMARQRRFLSHHRNHNGNHHQNQGSDPHARLGNDNCTTGLVAPHQPNSAAANWMYWQAMTGGQAGPLAPVVPADPLAGQTVVDRTTMHTQNSHQNRAASDRRQGWKPEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISITMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKCGKYMIRGVKVRQQGVKPETKKAGKTQKNQHGTNASNTAGTAANNGRSSPPKPKAEKKVAN* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01686 763 MobiDBLite consensus disorder prediction 729 750 - -
Phac8g01686 763 MobiDBLite consensus disorder prediction 72 110 - -
Phac8g01686 763 SMART B3_2 612 714 IPR003340 GO:0003677
Phac8g01686 763 MobiDBLite consensus disorder prediction 321 370 - -
Phac8g01686 763 MobiDBLite consensus disorder prediction 716 763 - -
Phac8g01686 763 CDD BfiI_C_EcoRII_N_B3 610 711 - -
Phac8g01686 763 MobiDBLite consensus disorder prediction 517 535 - -
Phac8g01686 763 Gene3D - 608 727 IPR015300 -
Phac8g01686 763 SUPERFAMILY DNA-binding pseudobarrel domain 611 707 IPR015300 -
Phac8g01686 763 FunFam B3 domain-containing transcription factor FUS3 608 723 - -
Phac8g01686 763 MobiDBLite consensus disorder prediction 509 535 - -
Phac8g01686 763 Pfam B3 DNA binding domain 613 709 IPR003340 GO:0003677
Phac8g01686 763 ProSiteProfiles B3 DNA-binding domain profile. 612 714 IPR003340 GO:0003677
Phac8g01686 763 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 264 729 IPR044800 GO:0003700
Phac8g01686 763 MobiDBLite consensus disorder prediction 325 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01686 Phac-Chr8 15302509 15306986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01686 39 745 B3 DNA Binding Superfamily AT3G24650 46.386 9.45e-163 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Phac8g01686 B3 3.9e-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01686 K09287 - gmx:100795226 1173.3