Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01673 ATGGTTTATACTTCCATCCCAGCATATATTGATCCAGCCAACTGGCAGCAACAGCAGCCAAATCATCAGCAGCAAGGCAACAACACTGCTGTCAGCTCCCACCTTATTCTTCCACCACCAATACAACCGCCGCCGCCTCCACCGTCACAACCTCATGGACTCGGTGGCAGTGCCACCGCCGGGTCCATAAGGCCAGGTTCCATGGCGGATAGGGCCAGGATGGCCAACATACCCATGCAGGAAGCTCCACAGAAGTGTCCAAGATGTGAATCCGCCAACACAAAGTTTTGCTACTTCAACAACTACAGCCTCTCTCAGCCTCGCCACTTCTGCAAGGCTTGCAGAAGGTACTGGACTCGTGGCGGAGCCTTGAGGAACGTCCCTGTTGGCGGCGGCTGCCGGAGGAACAAGAGGAGCAGAGGAAGCTCCGGAAGCAGCGCCAGGTCGCCGGCAAACTCCGATCGCCAAACGGCGAGTGCCGGCTCTGCTTCCACGACCAGTGGCTCCTCTTCTGCTGACATGGTGGCAGGCCTTGGCGGTACCGGTGTTCCGTCGTCTCTTAGATTCATGGCTCCATTGCATCATCTTGGGGATCACCACCTTGGTGTTGGTGGTGGAGGAGAAATAGGGTTAAACTATGGCTTGAACTATGGCGGAATTTCAGGCCCAATGGGAGGAATAGGAGACTTGAATTTTCATATAGGAAGCGCTTTGAATGGTGGTGGTGGTTCTGTGTTGTCTGGTTTGGACCAATGGAGGATGCAACAAACTCACCAATTTCCCTTCTTGTCTGGTTTGGAAGCTTCTTCATCACATGGGTTGTACCCATTTGATGGTGCTAGTGGTAGTGATGGCTATGGTGGCACTCCCATTAAGGTTTCAACTTCTGGGGTGATGTCTCAGTTTGCTTCTGTGAAAATGGAAGATAACCATCCGGAACTTGGTTTGCCTAGACAGTTCTTGGGAGTCAACAATAACCCTAATACAAATGAGCAATATTGGAATGGTGGTGGTGGTGGTGCCACTTCTGCTTGGACTGATCTTTCAGTCTTTAGCTCCTCTTCCACTACTACTAACCCACTATAG 1086 0.5184 MVYTSIPAYIDPANWQQQQPNHQQQGNNTAVSSHLILPPPIQPPPPPPSQPHGLGGSATAGSIRPGSMADRARMANIPMQEAPQKCPRCESANTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKRSRGSSGSSARSPANSDRQTASAGSASTTSGSSSADMVAGLGGTGVPSSLRFMAPLHHLGDHHLGVGGGGEIGLNYGLNYGGISGPMGGIGDLNFHIGSALNGGGGSVLSGLDQWRMQQTHQFPFLSGLEASSSHGLYPFDGASGSDGYGGTPIKVSTSGVMSQFASVKMEDNHPELGLPRQFLGVNNNPNTNEQYWNGGGGGATSAWTDLSVFSSSSTTTNPL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01673 361 MobiDBLite consensus disorder prediction 37 52 - -
Phac8g01673 361 MobiDBLite consensus disorder prediction 16 65 - -
Phac8g01673 361 MobiDBLite consensus disorder prediction 138 174 - -
Phac8g01673 361 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 53 166 IPR045174 GO:0003700|GO:0006355
Phac8g01673 361 MobiDBLite consensus disorder prediction 128 177 - -
Phac8g01673 361 MobiDBLite consensus disorder prediction 16 35 - -
Phac8g01673 361 ProSiteProfiles Zinc finger Dof-type profile. 84 138 IPR003851 GO:0003677|GO:0006355
Phac8g01673 361 Pfam Dof domain, zinc finger 83 138 IPR003851 GO:0003677|GO:0006355
Phac8g01673 361 ProSitePatterns Zinc finger Dof-type signature. 86 122 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01673 Phac-Chr8 14909342 14911480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01673 1 354 C2C2-Dof Transcription Factor Family AT2G37590 41.823 7.14e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phac8g01673 zf-Dof 5.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01673 - - gmx:100796820 530.791