Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01644 ATGTTTCATGATATGGCTGAGGTGGTGAAATCGGAGGAGTGTTGCCTGGAGAATAAGCAGTCTACTGCTGCTTCTTGCTCCTCTGTTTCTGAAGGCAGTGGCAGTGCAATTCACAAGTCTCCTGGGATATGTAGCCCTGCATCCACATCACCTTCCCATCGGCGGACCACTGGTCCTATCAGGCGTGCTAAGGGTGGTTGGACAGCACAGGAGGATGAAACATTAAGGAATGCTGTGGCAGTTTTTAAGGGAAAAAGTTGGAAGAAAATAGCCGAGTTTTTTCCTGATAGATCAGAAGTCCAGTGTTTGCATAGATGGCAAAAAGTTCTTAATCCAGAACTTGTTAAAGGACCTTGGACACAGGAGGAGGATGATAAAATTGTTGAACTGGTGACAAAATATGGGCCAACAAAATGGTCTTTGATAGCCCAGTCTTTACCTGGTCGAATAGGCAAACAATGTCGAGAGCGGTGGCACAATCATCTTAACCCTGAGATAAAGAAGGATGCCTGGACTTTGGAGGAGGAATTAGCCTTGATGAATGCTCATCGTATACATGGGAACAAATGGGCTGAAATAGCTAAGGTCCTTCATGGAAGGACTGATAATGCAATAAAGAATCATTGGAATAGTTCTTTGAAGAAAAAGTTAGATTTTTATTTAGCTACAGGAAGACTTCCACCAATTCCCAAGAATAGTCCACAAGTTACTGTCAAAGATACAATTAGACGTTCTGCTAGTAAATCAATACTTGTTTATTCAAATAAAGAATTAAATGCAGCTGTTGAAACATCATCTGAAACTACAGCCATTAGTAAGCTAGATGACAGTGGCAGGAATCAGTTTGAGTCCTCGGGAACAGTTAGAGAAGTTGGTGATTCTTCAAGTGTTCCTGCAAATGAATCTGCTGATTCTGACTGTGTAGAATGCAAGCCTGGATCTTCCAACATTGATCTTAGGTGTAGCAACTCAGAACAAATGTCAAAAGGTAATTGGGGAATAACTTATGGGCCAAGACCTGACAATTCTGGATTTAATGGACACTCCACTTTTGAGCATTGTACAAACAATGGTGACATGAGCACTACAAGCTTAATTGGAACATCTTTGCAAGAAAGTCCGACCCGTGGTTCTCTGTGTTATGAGCCACCACAGTTGCATAGCTCAATTCCCATAGATTCTCTTTATTTAAATTATATCTGCCAGCAGAATGAGTTTTGTTCGACTCCAACTTTGTCACCTATTGGTTTCTTCACTCCACCTCGTGTGAAGGGTGATGAATTATGCACTGAGACACCTGAATCAATTTTGAAAAGGGCTGCCAATACTTTTCCAAATACTCCTTCCATATTGAGGAGGAGGAGAACTGAGGTCCAAGCACTCACTAGTCCTAGTAAAATTTTGAAGGTAGATAATGATCCACGTTCTTCTAATGAAACAGGGAGAACCAATGATGATTCTGGTTCTAGGCATTTCTCCAGGAGTCCGGCAAGCCATGGCAATGTGAATGATATTCCCAGTAATAAGACATTCAATGCATCTCCCCCATATAGGTTAAGATCCAAGCGAACTGGGATTGTCAAGTCAGTGGAGAAACAACTGGAGTTTGCTTTTGACAAAGAGAAGAATGATGACAAGAGAAGCAATGTCATGACTGAAGATTGTCTCCATGAAAAAAAATTGGTTGCCACATAG 1695 0.4147 MFHDMAEVVKSEECCLENKQSTAASCSSVSEGSGSAIHKSPGICSPASTSPSHRRTTGPIRRAKGGWTAQEDETLRNAVAVFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVTKYGPTKWSLIAQSLPGRIGKQCRERWHNHLNPEIKKDAWTLEEELALMNAHRIHGNKWAEIAKVLHGRTDNAIKNHWNSSLKKKLDFYLATGRLPPIPKNSPQVTVKDTIRRSASKSILVYSNKELNAAVETSSETTAISKLDDSGRNQFESSGTVREVGDSSSVPANESADSDCVECKPGSSNIDLRCSNSEQMSKGNWGITYGPRPDNSGFNGHSTFEHCTNNGDMSTTSLIGTSLQESPTRGSLCYEPPQLHSSIPIDSLYLNYICQQNEFCSTPTLSPIGFFTPPRVKGDELCTETPESILKRAANTFPNTPSILRRRRTEVQALTSPSKILKVDNDPRSSNETGRTNDDSGSRHFSRSPASHGNVNDIPSNKTFNASPPYRLRSKRTGIVKSVEKQLEFAFDKEKNDDKRSNVMTEDCLHEKKLVAT* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01644 564 Pfam Myb-like DNA-binding domain 64 110 IPR001005 -
Phac8g01644 564 Pfam Myb-like DNA-binding domain 116 162 IPR001005 -
Phac8g01644 564 Pfam Myb-like DNA-binding domain 168 211 IPR001005 -
Phac8g01644 564 Gene3D - 169 234 - -
Phac8g01644 564 Gene3D - 63 115 - -
Phac8g01644 564 ProSiteProfiles Myb-like domain profile. 111 162 IPR001005 -
Phac8g01644 564 CDD SANT 67 110 IPR001005 -
Phac8g01644 564 ProSiteProfiles Myb-like domain profile. 163 213 IPR001005 -
Phac8g01644 564 MobiDBLite consensus disorder prediction 490 517 - -
Phac8g01644 564 CDD SANT 118 162 IPR001005 -
Phac8g01644 564 MobiDBLite consensus disorder prediction 273 310 - -
Phac8g01644 564 MobiDBLite consensus disorder prediction 456 471 - -
Phac8g01644 564 PANTHER MYB PROTEIN-RELATED 64 136 - -
Phac8g01644 564 SMART sant 63 112 IPR001005 -
Phac8g01644 564 SMART sant 167 215 IPR001005 -
Phac8g01644 564 SMART sant 115 164 IPR001005 -
Phac8g01644 564 MobiDBLite consensus disorder prediction 456 517 - -
Phac8g01644 564 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 110 IPR017930 -
Phac8g01644 564 MobiDBLite consensus disorder prediction 472 489 - -
Phac8g01644 564 CDD SANT 170 213 IPR001005 -
Phac8g01644 564 FunFam Transcriptional activator Myb isoform A 63 115 - -
Phac8g01644 564 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 167 217 IPR017930 -
Phac8g01644 564 MobiDBLite consensus disorder prediction 42 56 - -
Phac8g01644 564 MobiDBLite consensus disorder prediction 273 302 - -
Phac8g01644 564 ProSiteProfiles Myb-like domain profile. 59 110 IPR001005 -
Phac8g01644 564 Gene3D - 116 167 - -
Phac8g01644 564 MobiDBLite consensus disorder prediction 27 68 - -
Phac8g01644 564 FunFam Transcriptional activator Myb isoform A 116 168 - -
Phac8g01644 564 FunFam Transcription factor MYB3R-2 169 235 - -
Phac8g01644 564 SUPERFAMILY Homeodomain-like 61 117 IPR009057 -
Phac8g01644 564 SUPERFAMILY Homeodomain-like 113 209 IPR009057 -
Phac8g01644 564 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 166 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01644 Phac-Chr8 14376456 14388921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01644 9 556 MYB Transcription Factor Family AT3G09370 48.122 1.43e-155 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac8g01644 Myb_DNA-binding 2.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01644 K09422 - gmx:778081 1008.05