Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01629 ATGATTGAGTCAGCCATGTCAAAGACAATGATGGAGGAAGTAATGGCCACTTGGTCAGAGGGGTCAGAGGATGATGACCTTGTGAAAGAGCTTTTGGATGATGGGTCTCCCCTTCTTGTGCTTCCACAGGAGGCAATTCAACCCCCCATAACAAACGCCTCTTCAAGTGACCATGCCTTTAATAGGTTCCTCTCCAACATTTACTCAGGACCTACTATCTCAGATATTGAAAATGCTTTGTCACTGAACAACCAAAGAGACCACTTCCCACCACTCTCATCACCCAGCAGAGTTTCCATTTTGGAGAGGGGTTTGAGCAAGATTGAGAATAAGTATACCCTCAAAATCAAATGCTTTGGCAATGGGATGGGAGATGATGGATACAAGTGGAGGAAGTATGGACAGAAATCCATTAAGAATAGCCCAAATCCTAGGTAA 438 0.4429 MIESAMSKTMMEEVMATWSEGSEDDDLVKELLDDGSPLLVLPQEAIQPPITNASSSDHAFNRFLSNIYSGPTISDIENALSLNNQRDHFPPLSSPSRVSILERGLSKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPR* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01629 145 ProSiteProfiles WRKY domain profile. 119 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g01629 145 SUPERFAMILY WRKY DNA-binding domain 122 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g01629 145 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 92 145 IPR044810 GO:0003700
Phac8g01629 145 Pfam WRKY DNA -binding domain 125 145 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g01629 145 Gene3D WRKY domain 120 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01629 Phac-Chr8 14004580 14006723 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01629 11 145 WRKY Transcription Factor Family AT5G43290 45.775 1.20e-25 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g01629 WRKY 3.1e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01629 - - gmx:100810459 224.172