Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01628 ATGATTGAGTCAGCCATGTCAAAGACAATGATGGAGGAAGTAATGGCCACTTGGTCAGAGGGGTCAGAGGATGATGACCTTGTGAAAGAGCTTTTGGATGATGGGTCTCCCCTTCTTGTGCTTCCACAGGAGGCAATTCAACCCCCCATAACAAACGCCTCTTCAAGTGACCATGCCTTTAATAGGTTCCTCTCCAACATTTACTCAGGACCTACTATCTCAGATATTGAAAATGCTTTGTCACTGAACAACCAAAGAGACCACTTCCCACCACTCTCATCACCCAGCAGAGTTTCCATTTTGGAGAGGGGTTTGAGCAAGATTGAGAATAAGTATACCCTCAAAATCAAATGCTTTGGCAATGGGATGGGAGATGATGGATACAAGTGGAGGAAGTATGGACAGAAATCCATTAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACAAACCCAAGGTGCAGTGCCAAGAAGCAGGTTGAGAGGTCCATTGAGGACCCAGACACTCTTATCATAACCTATGAAGGGCTCCACTTGCACTTTGCTTACCCATATTTCCTCATGGGCCAACCACACCAATCTCAATCTCATCCACCCATCAAGAAGTCCAAGCCCACTTCTCTTCAGGGCCCAGCCCAAGCCCATAGATCAGATTATGTTCGTGGAGCCCAGGAAACCCAAACAAATGCCACTTCGGGTGTGGTGCCATCCACTTCATTGGACTCTCCACAGGATATGGCCCAGCAAAACATGGGCTCACAAGGTTTGCTTGAAGATATGGTGCCTTTCATGATTCGGAACCCAACAAACAATGTGAACAGTGCTCACACAAAATTTTCTTGTTCTACATTTCGTTCTCCTCCAACTTCACCTCTGTGGAGTTCTAATTACTCCACCTCCTGCTACACCGTTGGCTTAAATTCTAGCACCTAA 936 0.4615 MIESAMSKTMMEEVMATWSEGSEDDDLVKELLDDGSPLLVLPQEAIQPPITNASSSDHAFNRFLSNIYSGPTISDIENALSLNNQRDHFPPLSSPSRVSILERGLSKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSIEDPDTLIITYEGLHLHFAYPYFLMGQPHQSQSHPPIKKSKPTSLQGPAQAHRSDYVRGAQETQTNATSGVVPSTSLDSPQDMAQQNMGSQGLLEDMVPFMIRNPTNNVNSAHTKFSCSTFRSPPTSPLWSSNYSTSCYTVGLNSST* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01628 311 ProSiteProfiles WRKY domain profile. 119 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g01628 311 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 98 215 IPR044810 GO:0003700
Phac8g01628 311 MobiDBLite consensus disorder prediction 221 239 - -
Phac8g01628 311 SUPERFAMILY WRKY DNA-binding domain 122 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g01628 311 SMART WRKY_cls 124 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g01628 311 FunFam WRKY transcription factor 111 185 - -
Phac8g01628 311 Gene3D WRKY domain 120 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g01628 311 Pfam WRKY DNA -binding domain 125 181 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g01628 311 MobiDBLite consensus disorder prediction 193 239 - -
Phac8g01628 311 MobiDBLite consensus disorder prediction 193 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01628 Phac-Chr8 14004580 14007775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01628 11 272 WRKY Transcription Factor Family AT5G43290 41.463 5.60e-53 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g01628 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01628 - - gmx:100810459 498.819