Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01618 ATGTCGTTGCACCGTGGTGAAGAAGATGAGCTCTACGAGCAGCTGTGGAAGGCGTGTGCAGGACCCCATGTGGAAATTCCTCGTGCTGGCCAAAGGGTCTTCTACTTCCCTCAGGGACACATGGAACAGTTAGAAGTATCAACAAATCAGGAACTAAATCAAAGGATTCCACTGTTCAAACTTCCCTCCGAGATCCTTTGCCGTGTCGTCAACGTCCATTTACTGGCTGAACAAGAAACAGACGAGGTTTATGCACAGATTACTCTGGTGCCTGAAAATAATCAAACTGAGCCTACATGCCCTGATCCGTGCCCTTCTGAAGTTCCAAGGCCAAGAGTTCACTCCTTCTGCAAGGTCTTAACCGCCTCTGATACAAGCACCCACGGTGGCTTCTCTGTCCTCCGGAAGCATGCCACGGAATGTCTTCCAGCATTGGACATGTCGAAATCAACCCCAACTCAAGAATTGGTTGCTAAGGATCTTCATGGATATGAATGGCGCTTTAAGCATATATTTAGAGGTCAGCCGCGCAGACACTTGCTCACAACCGGATGGAGTACTTTTGTGACTTCCAAGAGATTAGTTGCTGGAGACACCTTTGTGTTTCTGAGAGGGAGCAATGGAGAACTGCGAGTTGGAGTGAGGCGTCTTACTCCTGTTCAAAACAGCATGCCATCATCTGTGATTTCTAGTCAGAGCATGCACCTAGGAGTTCTTGCAACTGCATCTCATGCTGTAGCAACTCAGACTCTTTTTGTTGTATATTATAAACCAAGGACAAGCCAGTTTATTGTAAGTGTGAACAAGTATTTAGAGGCTATCAACCAAAAATGTAATGTTGGCATGAGATTGAAGACGAGGTCTGAAGGGGATGATTCTACTGAAACAGACAAAAGATTTTCGGGCACAATAATTGGAGTTGAGGATATTTCCCCTCATTGGGTAAATTCAAAATGGCGATCACTCAAGGTTCAATGGGATGAACCTCCATCTTTTCCAAGACCTGATAGAGTTTCACCATGGGAGATAGAACCCATTCTGGCTTCTGTTCCTACAACAATATCATCTCAACCTGTTATAAAGAATAAAAGGCCTCGACAAGCAAGTGAAGTTCCAGATCTTGGAGACACACCATTAATTGCCCCTACTTTCTGGGATGCTGGGCTGACACAGTCTGATATTACACAACTTGGTGTTATGGCCGAAAGCAAAAGGAGTGAAAGTAGTGCTCACATGTGGCATCATAACAGCAGCAATGGTATATCAATGAATCAGAGAAAAGCAAGTTGGCTGTCTTGTCCTTCTCATTTATATCTTGACACAACTGATGATAGCAAGAGCGTATCAGCTTCGCCTATTTCAAAAACTCACTCGGAAAGATTGAACAATGACCATTGCCTTGACCAGGTTGACAAGGAGATCAGCAAAGTAGAGCCTGCAACAGGCTGCAGATTGTTTGGGATTGACCTTATTGATCATACAAGGAGCAGCTCTCTTTCTGTAGATAATGCATCTGGAGTCACATCAGAGGGCAGAACTGATGTAAACCATGAGTCTGATATCTCAAAGGCTTCTAAAGAATGGAAACAAGAACAGCTACAAGTATCCCCAAAAGAGACTCAAAGCAAGCAAATTTGTAGCAGAAGTTGCACTAAGGTGTTTGACATGTCACATGTGTTGATTATTTAG 1689 0.4405 MSLHRGEEDELYEQLWKACAGPHVEIPRAGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLPSEILCRVVNVHLLAEQETDEVYAQITLVPENNQTEPTCPDPCPSEVPRPRVHSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGSNGELRVGVRRLTPVQNSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIVSVNKYLEAINQKCNVGMRLKTRSEGDDSTETDKRFSGTIIGVEDISPHWVNSKWRSLKVQWDEPPSFPRPDRVSPWEIEPILASVPTTISSQPVIKNKRPRQASEVPDLGDTPLIAPTFWDAGLTQSDITQLGVMAESKRSESSAHMWHHNSSNGISMNQRKASWLSCPSHLYLDTTDDSKSVSASPISKTHSERLNNDHCLDQVDKEISKVEPATGCRLFGIDLIDHTRSSSLSVDNASGVTSEGRTDVNHESDISKASKEWKQEQLQVSPKETQSKQICSRSCTKVFDMSHVLII* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01618 562 Pfam Auxin response factor 242 323 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Phac8g01618 562 FunFam Auxin response factor 277 350 - -
Phac8g01618 562 SUPERFAMILY DNA-binding pseudobarrel domain 107 245 IPR015300 -
Phac8g01618 562 FunFam Auxin response factor 114 218 - -
Phac8g01618 562 Pfam B3 DNA binding domain 116 216 IPR003340 GO:0003677
Phac8g01618 562 Gene3D - 277 350 - -
Phac8g01618 562 SMART B3_2 116 218 IPR003340 GO:0003677
Phac8g01618 562 Gene3D - 113 217 IPR015300 -
Phac8g01618 562 CDD B3_DNA 114 216 IPR003340 GO:0003677
Phac8g01618 562 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 553 IPR044835 GO:0003677|GO:0006355|GO:0009725
Phac8g01618 562 MobiDBLite consensus disorder prediction 499 538 - -
Phac8g01618 562 MobiDBLite consensus disorder prediction 513 527 - -
Phac8g01618 562 ProSiteProfiles B3 DNA-binding domain profile. 116 218 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01618 Phac-Chr8 13742199 13747495 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01618 4 553 B3 DNA Binding Superfamily AT4G23980 57.244 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Phac8g01618 B3 4.6e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01618 K14486 - gmx:100780060 967.607