Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01607 ATGGAGGAGGGTCAATGTTTGATCAGGAGTAAGAGAAAGTACTCTATGAGTCTTAGTCTTGATGATTCTTCTACTAATTACCCTTCGAATGAAGACCACTCATGGGAAGAGCAAGCCTTTGCTAAAGATGCAGCTTGTTCTGGTTGCGTGTGGCCACCACGATCATATTCTTGTACCTTTTGCACAAGAGAATTTAGGTCAGCACAGGCTTTAGGAGGCCATATGAATGTTCATAGAAGAGATAGAGCAAGACTAAAGCAGCCATATAGTCCTCAGAATGAAATCCTCAATGATGATCTTGAGAAAACTCAAACCCAGAATTCGGTTCAAATTTCTTTTACTTCATTGGGTTACTTATACCCACCTTCTCTTAGTGGATTGGCTCATAACACTAACCCTAATTCTGATCCTTATTCTCATGTTGTTGCTTCACCTTCCAATGTTTTAGGCACTTCACTTAACAAAAGATGCAGAGAGAAACCCCAGATTCCACTATACAGTAATTCTTCAATTTTCAAAGGATGTCACGAGTCTTCCCCTTCTCTTTCTTCTAAATCCTGGTCAAATTTAACTGATGGTGACTTCAGATTTTGTTCAAGTAGGCTCGATCTTGAAGCCAGTTTTGAGAAAAAATTGCAGGGATTGGATTCTGGGTGTAGGAAGGGTAAAACTGAGGTGGCTGTGAGCATGAACTTGTTTATGAGTCGAGCTCACCCAGTTGTGCAGTTTGAGAATAAAGAGACAGATACAAGTTTCAAGAACAGAAAATCAGACGCTTCATCCATTCCATTGTTCCCCAAATCATGTTCAGTTGATAAGCATCATGTGCAGTCAGAGATGTTTGATTTTAGCCCTAGCTCCATAGAAGAGCTAGATCTGGAGCTAAGGCTTGGTTATAGGTCCGAGGTATAG 912 0.4068 MEEGQCLIRSKRKYSMSLSLDDSSTNYPSNEDHSWEEQAFAKDAACSGCVWPPRSYSCTFCTREFRSAQALGGHMNVHRRDRARLKQPYSPQNEILNDDLEKTQTQNSVQISFTSLGYLYPPSLSGLAHNTNPNSDPYSHVVASPSNVLGTSLNKRCREKPQIPLYSNSSIFKGCHESSPSLSSKSWSNLTDGDFRFCSSRLDLEASFEKKLQGLDSGCRKGKTEVAVSMNLFMSRAHPVVQFENKETDTSFKNRKSDASSIPLFPKSCSVDKHHVQSEMFDFSPSSIEELDLELRLGYRSEV* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01607 303 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Phac8g01607 303 Pfam C2H2-type zinc finger 56 80 - -
Phac8g01607 303 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Phac8g01607 303 PANTHER OS07G0101800 PROTEIN 22 300 - -
Phac8g01607 303 Gene3D Classic Zinc Finger 52 112 - -
Phac8g01607 303 SUPERFAMILY beta-beta-alpha zinc fingers 53 82 IPR036236 -
Phac8g01607 303 SMART c2h2final6 56 78 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01607 Phac-Chr8 13540626 13541962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01607 29 87 C2H2 Transcription Factor Family AT2G37740 76.271 1.02e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phac8g01607 zf-C2H2_6 1.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01607 - - vra:106758996 534.258