Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01569 ATGGCTGAGGGTTTTGAGCATTACCATGTCCCACAACAAATTAGGAGGGACAAGTTAAGAGTTTTCGCTCAGAACCAACCTTCTTTCGTTGAATCTTCCTCTATCCTTCATCCCACTTGTCCACCTTTAACCTCTCTCTACGATCCTTCTCTTATTCCCTCTGATTTGTTAGCTTGTGCCACCCAACAAGGTGCCGCTGCTAAGGGAGAAGGTTCCAATTTGATGATGGGGTTTGTGGAAGGGGGGGTTGTCAATGGTGATGCAATTCATGTTATCAACAGTAATAGCAACCACCACAACAACAACCCTTTTCTCTATCAGCTTCAGAACCTTAGGGAATTTGGTGATGGCTACAATGATGCGAGTGAAATGATGGTGTTCAAGCCTGAGCCTTTGTCTTTGTCTTTGTCTTCCCAGACTAACAACACTCATCACCCTTTGGAACTGAATCTTCAGCGATTTGGGGCTGTTATTCCAGGTTTGGTTGGAAGGAACAGTGAGGTTTCGAGGAATTCGGTTCCACTTGGACCCTTTACGGGGTATGCTTCGATATTGAAGGGATCGAGGTTCTTGAAACCTGCACAGCAATTATTGGAAGAGTTGTGTGATGGCGGGGTTCGTGGAATTTACGCTACCGAGAAGTCTCTTGCTCCTGATGCATCGTTGATGGAACCTCCTCATGAGGGTTTGAGTGCTAGTGGAGTTGTTGGTGGGGATGATCCACTTGGGGAATACGAGAATGAGAGTAGGAAAAAGAAGTGTAGATTATTAACCATGCTTGACGAGGTTTACAGGAGGTACAGACATTATTATCAACAGATGCATGCAGTGATAACTTCATTTGAGTATGTTTCTGGTCTTGGTAATGCAGCCCCGTTTGCAAGTTTGGCTATAAATGCAATGTCCAAACATTTTAAAGGCTTGAAGAGTGCTATCACTGACCAGCTTCAGTTCATCAACAAGGCTCCTTTCCAGATTAGTAACAGAAAGGATGAATCTCCAAGGTTGCACAGCAGTGATAGGGGCACTTACAGCCAAAGGCCAGGGTTTCTTGAGCACCAACAACCAGTTTGGCGACCTCAAAGAGGACTTCCTGAGCGTGCTGTCAGTGTTCTCAGGGCCTGGTTGTTTGAACACTTTCTTCACCCTTATCCTACTGATACCGACAAGCTAATGTTGGCTAAACAAACTGGTCTATCTCGCAACCAGGTGTCTAATTGGTTTATTAATGCAAGAGTAAGGCTTTGGAAACCAATGGTGGAAGAGATACATATGCTAGAATCACAGCAAGCTCAAAAAAGGCCACAGAGGGAAGAACAAAGTAGGAGAAACTTAAGTGTTGATCATTTACCTTCAGACAACTCTCTTGTTACTGAGAATCCATCATCCTCCATGGAGAAGTTTCAGGATACCCCTTTTAAACAACACAGAAATGAAATTGCTAATATGCAAGTGAGGGGTCAGGAACAGCTGAATCAAACTAACACGAGCAATCAGCAAGTGGGTGTTGGAGTGAGCATGGGGAGTGGTGGTGGTGGGGCAAGTAGTAATAATGGTGTGTCTCTCACACTTGGTCTTCATCAAAATCATGGTATTGGGTTGTCTGAGCCCTTTGGCATGAGTGCAGCTCAACGTTTTGGTGTTACCCTTCAGCCTGAGGGCTATGTTATAAGTGGTTTTGAATCACAAAATCGACATTTTGGAAGAGATGTTATTGGAGGAGGGCAACTGTTGCATGATTTTGTAGGCTGA 1752 0.4446 MAEGFEHYHVPQQIRRDKLRVFAQNQPSFVESSSILHPTCPPLTSLYDPSLIPSDLLACATQQGAAAKGEGSNLMMGFVEGGVVNGDAIHVINSNSNHHNNNPFLYQLQNLREFGDGYNDASEMMVFKPEPLSLSLSSQTNNTHHPLELNLQRFGAVIPGLVGRNSEVSRNSVPLGPFTGYASILKGSRFLKPAQQLLEELCDGGVRGIYATEKSLAPDASLMEPPHEGLSASGVVGGDDPLGEYENESRKKKCRLLTMLDEVYRRYRHYYQQMHAVITSFEYVSGLGNAAPFASLAINAMSKHFKGLKSAITDQLQFINKAPFQISNRKDESPRLHSSDRGTYSQRPGFLEHQQPVWRPQRGLPERAVSVLRAWLFEHFLHPYPTDTDKLMLAKQTGLSRNQVSNWFINARVRLWKPMVEEIHMLESQQAQKRPQREEQSRRNLSVDHLPSDNSLVTENPSSSMEKFQDTPFKQHRNEIANMQVRGQEQLNQTNTSNQQVGVGVSMGSGGGGASSNNGVSLTLGLHQNHGIGLSEPFGMSAAQRFGVTLQPEGYVISGFESQNRHFGRDVIGGGQLLHDFVG* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01569 583 CDD homeodomain 358 419 IPR001356 GO:0003677
Phac8g01569 583 SUPERFAMILY Homeodomain-like 360 425 IPR009057 -
Phac8g01569 583 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 105 438 - -
Phac8g01569 583 FunFam BEL1-like homeodomain protein 9 361 423 - -
Phac8g01569 583 Pfam Homeobox KN domain 375 414 IPR008422 GO:0003677|GO:0006355
Phac8g01569 583 MobiDBLite consensus disorder prediction 427 446 - -
Phac8g01569 583 MobiDBLite consensus disorder prediction 427 472 - -
Phac8g01569 583 MobiDBLite consensus disorder prediction 492 516 - -
Phac8g01569 583 MobiDBLite consensus disorder prediction 447 472 - -
Phac8g01569 583 Pfam Associated with HOX 184 313 IPR006563 -
Phac8g01569 583 Gene3D - 361 423 - -
Phac8g01569 583 SMART prehox3 179 314 IPR006563 -
Phac8g01569 583 ProSiteProfiles 'Homeobox' domain profile. 355 418 IPR001356 GO:0003677
Phac8g01569 583 SMART HOX_1 358 422 IPR001356 GO:0003677
Phac8g01569 583 MobiDBLite consensus disorder prediction 329 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01569 Phac-Chr8 12892062 12898628 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01569 1 583 Homeobox Transcription Factor Family AT5G02030 45.411 8.78e-124 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Phac8g01569 POX 7.3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01569 - - vun:114185080 1039.25