Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01454 ATGGTGTTCTTATTTCCAACGTTTCAGTTCATGAAGCTCCTATCATTATGGCTGCTTCTACTTGTAATGGCCAATTCTCTCCATGCAGCATTGTCTTCCTCACTCTCACTTCAACACACAGAAGCAAACGCTCTTTTGACGTGGAAAGCAAGCCTTGACAAGCAAAGTCAAACATTACTATCTTCATGGGATGGCAATACTTCTTGCAGTTGGCTGGGAATTTCTTGTGACTACTCAGGATCAGTCTCCAACATAAATCTTACAAACATTGGATTAAGTGGTACGCTTCAAACTCTCAATTTTTCATCACTTCCAAACATCCTCACTCTAGACATGAGTCTTAACTCCTTGAGTGGAAGTATTCCTCCTCAAATTGGAGTCTTATCCAAACTCACTCATCTTGATTTAAGTCTCAATCATCTCACTGGACCAATTCCTTCTGAAATAACTCACTTGGTCAATCTTCACTTTTTACATTTGGTAAATAATGTTTTCAATGGTTCTATTCCTGAAGAAATAGGTGCTTTAAGGAATTTGAGAGAGATTAAAATTGAATTGGCCAATCTCACTGGGACAATCCCAAATTCTATTGGAAAGCTATCATTCTTGTCAATACTTTCTTTATGGAATTGCAGTCTCACAGGATCTATTCCAAAGTCTGTTGGGAATTTGACCAGTTTATTAATTCTAGAGTTTTCGCTCAACAACCTTTACGGACATATTCCTCACGAAATTGGGAATTTGTCAAACTTAAAGTTGTTGGGCCTTGGAGGTAATAACTTATATGGTAGTATTCCTCAAGAAATAGGTAAGTTGCAAAACCTAAATATGCTATATATACCTGCAAACAATTTATCTGGAAACATTCCCGTGGCAATTGGGAAGTTGTTCAACTTGAAGCAGTTATATCTATCCAATAATAATCTTTCGGGTTCTATTCCTCAAGAAATTGGAATGATGACAAATTTGGATCAACTTGATTTGTCCGATAACTCTTTGTCAGGTTCAATCCCCCCTACAATTGGAAATTTGAGCAAGCTAGGCTATTTGTACATGTATAGAAACCATCTATCTGGATCCATTCCTAATGAAATAGGAAAACTACATTTTCTCCAGACGATTCAATTGTTAGAAAATAATCTTTCTGGGTCAATTCCATCTTCCATCGGTAACTTGGTCAATTTGAAATCTATTCGTCTTGACAGAAACAAACTCTCTGGAACAATTCCTTCCACTATTGGTAACTTGACAGAGCTCACCACACTTGTTTTATTCTCAAATCAGCTGAGTGGACACATTCCAATAGAAATGAATATGCTTAACAACCTGGAAACATTGCATTTATATGAAAATAATTTCATTGGTCATTTGCCTCACAATGTTTGCATCAATGGAAAGTTGCTAAAGTTTACTGTTAATAGTAACTATTTCACGGGTCCAATACCCAAGAGTTTGAAGAATTGCACCAGTCTCAAAAGAGTTTGGCTTCAACAAAACCATTTGACAGGAAATATAACAGAGGACTTGGGTGTATACCCAAACTTGGATTACATAGATCTAAGTGAAAATAACTTTTATGGCCATCTTTCCCCACAATGGGGAAAATGCCATAATCTCACATGTCTCAAAATCTCCAACAACAATTTATCAGGAAGCATTCCACCAGAATTAAGTCAGGCAACCAAGTTACAAGTACTTCAACTGTCTTCAAATTACCTCACAGGAGACATTCCTGAACATTTAGGTAATTTGACCTACTTGTTTGAACTCTCTCTCAATAGTAATAATTTTTCAGGGAATGTTCCTATACAAATAACAACATTGCAAAGTCTTGAGACCTTAGAGCTCGGAGCAAATAGTTTTTCTGGCTTAATTCCAAACCAACTTGGTAATTTGGTCAAGTTATTACATTTGAATTTGAGCCAAAATAAATTTAGGGAAAATATTCCATACGAGTTTGGTAAATTAAAATATCTTCAAAGTCTTGATCTTAGTATGAACATTTTGAGTGGAAGAATACCATCGATGCTGGAAGAGTTGAAACGCTTAGAAACATTAAACCTCTCACACAATCATCTTTCAGGCGATCTCTCCAGCCTTGATGAGATGATAAGCTTAACATCTGTTGATATATCATACAACCAATTAGAGGGTCCACTTCCAAACATTTCAGCCTTTCAGATGGCTACTATCGAAGCATTGAGAAATAATAAAGGCTTGTGTGGTAATGTCTCAGGCTTGGAACCATGCCCAACATCACGTGACCAATCTCAAAATCATAAGACTAACAAAGTCCTATTGGTTATTCTAGCCATTGGTTTGGGCACTTCCATGCTAGCATTATTCGTCTTTGGAGTCTTATATTATCTTTGTAGAAGGTTAAAGACAAAAGAACATCCGGATGTAGAATCATTATGCCAAAATCTTTTTGCAGTATGGAGTTTTGATGGAAAGATGGTGTATGAGAACATAATTGAAGCCACGGAAGAGTTTGATAATAAACATCTCATTGGAGTTGGAGGACAAGGAAGTGTTTACAAAGCTGAATTGCAAACAAATCAAATTGTTGCTGTTAAGAAACTCCATTCAGTACAAAATGGAGAAATGTTGTTCAATGATAAAGCTTTCAAAAGTGAAATTCAAGCTTTGACAGAGATTCGACATCGTAATATTGTGAGGCTATATGGGTTTTGTTCTCATTCCCGATACTCATTTTTGGTGTATGAGTTCTTAGAAAAGGGGAGCATAGAAAAGATTTTAAAAGACGATGAAGAGGCAATTGCATTTAATTGGAATAGGAGGATTGATGCCATTAAAGGAGTAGCAAATGCTTTATGCTATATGCATCATGATTGTTCACCTTCAATTGTTCATCGAGATATATCAAGCAAGAATGTTCTTTTGAATTTGGAGTATGTGGCTCATGTCTCAGATTTTGGAACAGCCAAACTTCTTAATCCTAATTCCACCAATTGGACCTCATTTGTGGGAACTTTTGGATATGCTGCTCCAGAACTTGCATACACAATGAAAGTAAATGAAAAATGTGACGTGTACAGCTTCGGGGTATTGGCTCTAGAAATACTTTTTGGAGAGCACCCTGGAGATTTTGTAACTTTGTTACTGTCTACATCCAATGTCATGGATTCAATACTTGATATTCCTTCATTGTTGGGTAAGTTAGATCAACGTCTCCCATATCCTACAAATATTGCTAAGGAGATAGCTTTGATTGTAAGGATAGCAAATGTTTGCTTGAGTGAAAGTCCTAGTTCTCGTCCTACCATGGAGCAAGTTGTCAACTACTCTTCAATGTAG 3318 0.3653 MVFLFPTFQFMKLLSLWLLLLVMANSLHAALSSSLSLQHTEANALLTWKASLDKQSQTLLSSWDGNTSCSWLGISCDYSGSVSNINLTNIGLSGTLQTLNFSSLPNILTLDMSLNSLSGSIPPQIGVLSKLTHLDLSLNHLTGPIPSEITHLVNLHFLHLVNNVFNGSIPEEIGALRNLREIKIELANLTGTIPNSIGKLSFLSILSLWNCSLTGSIPKSVGNLTSLLILEFSLNNLYGHIPHEIGNLSNLKLLGLGGNNLYGSIPQEIGKLQNLNMLYIPANNLSGNIPVAIGKLFNLKQLYLSNNNLSGSIPQEIGMMTNLDQLDLSDNSLSGSIPPTIGNLSKLGYLYMYRNHLSGSIPNEIGKLHFLQTIQLLENNLSGSIPSSIGNLVNLKSIRLDRNKLSGTIPSTIGNLTELTTLVLFSNQLSGHIPIEMNMLNNLETLHLYENNFIGHLPHNVCINGKLLKFTVNSNYFTGPIPKSLKNCTSLKRVWLQQNHLTGNITEDLGVYPNLDYIDLSENNFYGHLSPQWGKCHNLTCLKISNNNLSGSIPPELSQATKLQVLQLSSNYLTGDIPEHLGNLTYLFELSLNSNNFSGNVPIQITTLQSLETLELGANSFSGLIPNQLGNLVKLLHLNLSQNKFRENIPYEFGKLKYLQSLDLSMNILSGRIPSMLEELKRLETLNLSHNHLSGDLSSLDEMISLTSVDISYNQLEGPLPNISAFQMATIEALRNNKGLCGNVSGLEPCPTSRDQSQNHKTNKVLLVILAIGLGTSMLALFVFGVLYYLCRRLKTKEHPDVESLCQNLFAVWSFDGKMVYENIIEATEEFDNKHLIGVGGQGSVYKAELQTNQIVAVKKLHSVQNGEMLFNDKAFKSEIQALTEIRHRNIVRLYGFCSHSRYSFLVYEFLEKGSIEKILKDDEEAIAFNWNRRIDAIKGVANALCYMHHDCSPSIVHRDISSKNVLLNLEYVAHVSDFGTAKLLNPNSTNWTSFVGTFGYAAPELAYTMKVNEKCDVYSFGVLALEILFGEHPGDFVTLLLSTSNVMDSILDIPSLLGKLDQRLPYPTNIAKEIALIVRIANVCLSESPSSRPTMEQVVNYSSM* 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01454 1105 FunFam MDIS1-interacting receptor like kinase 2 911 1105 - -
Phac8g01454 1105 Gene3D Ribonuclease Inhibitor 37 185 IPR032675 -
Phac8g01454 1105 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 371 1101 - -
Phac8g01454 1105 PRINTS Leucine-rich repeat signature 323 336 - -
Phac8g01454 1105 PRINTS Leucine-rich repeat signature 680 693 - -
Phac8g01454 1105 FunFam Leucine-rich repeat receptor protein kinase MSP1 794 910 - -
Phac8g01454 1105 ProSiteProfiles Leucine-rich repeat profile. 298 320 IPR001611 GO:0005515
Phac8g01454 1105 FunFam Leucine-rich receptor-like protein kinase family protein 195 291 - -
Phac8g01454 1105 FunFam LRR receptor-like serine/threonine-protein kinase 294 367 - -
Phac8g01454 1105 Gene3D Ribonuclease Inhibitor 295 464 IPR032675 -
Phac8g01454 1105 SUPERFAMILY L domain-like 52 290 - -
Phac8g01454 1105 SMART LRR_typ_2 440 464 IPR003591 -
Phac8g01454 1105 SMART LRR_typ_2 632 656 IPR003591 -
Phac8g01454 1105 SMART LRR_typ_2 152 176 IPR003591 -
Phac8g01454 1105 SMART LRR_typ_2 392 416 IPR003591 -
Phac8g01454 1105 SMART LRR_typ_2 320 344 IPR003591 -
Phac8g01454 1105 SMART LRR_typ_2 248 272 IPR003591 -
Phac8g01454 1105 SMART LRR_typ_2 608 631 IPR003591 -
Phac8g01454 1105 SMART LRR_typ_2 128 151 IPR003591 -
Phac8g01454 1105 SMART LRR_typ_2 680 707 IPR003591 -
Phac8g01454 1105 SMART LRR_typ_2 296 319 IPR003591 -
Phac8g01454 1105 Gene3D Transferase(Phosphotransferase) domain 1 911 1105 - -
Phac8g01454 1105 SUPERFAMILY L domain-like 494 742 - -
Phac8g01454 1105 Gene3D Ribonuclease Inhibitor 465 759 IPR032675 -
Phac8g01454 1105 Gene3D Ribonuclease Inhibitor 186 292 IPR032675 -
Phac8g01454 1105 SUPERFAMILY RNI-like 215 571 - -
Phac8g01454 1105 FunFam Uncharacterized protein 462 759 - -
Phac8g01454 1105 ProSiteProfiles Protein kinase domain profile. 831 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01454 1105 Pfam Protein kinase domain 832 1102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01454 1105 FunFam Nuclear pore complex protein NUP107 38 194 - -
Phac8g01454 1105 Pfam Leucine rich repeat N-terminal domain 40 77 IPR013210 -
Phac8g01454 1105 FunFam MDIS1-interacting receptor like kinase 2 isoform A 368 461 - -
Phac8g01454 1105 SUPERFAMILY Protein kinase-like (PK-like) 818 1102 IPR011009 -
Phac8g01454 1105 Pfam Leucine rich repeat 274 333 IPR001611 GO:0005515
Phac8g01454 1105 Pfam Leucine rich repeat 513 573 IPR001611 GO:0005515
Phac8g01454 1105 Gene3D Phosphorylase Kinase; domain 1 793 910 - -
Phac8g01454 1105 ProSitePatterns Tyrosine protein kinases specific active-site signature. 956 968 IPR008266 GO:0004672|GO:0006468
Phac8g01454 1105 ProSiteProfiles Leucine-rich repeat profile. 682 704 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01454 Phac-Chr8 11424845 11428304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01454 19 1004 Receptor kinase-like Gene Family AT4G08850 43.300 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Phac8g01454 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01454 - - gmx:100811066 1506.5