Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01428 ATGGGATCAAGCAGTTTTCTATGGAGCTGTACTAAAAAGTTTGTCACAGCCGCTGTCATCACTGTGACTGTGTCTGATCGTTATGTGACTGTTGTTCCTGTTCGAGGTGGCTCTATGTCGCCCACATTAAATCCTAAAACCGGTTCTCCGATGGGAGATGTTTTCGATGACTATGTTTTGGTTGAGAAATTTTGCCTTTGGAAGTACAAATTTTCCAATGGCGACGTGGTGGTTTACCGCTCCCCAACGAATCACAAGGAGACACACATAAAAAGAATAGCTGCATTGCCTGGTGAATGGCATGGCACTCATGATAAAAGTGATGTGATTCAGATTCCATCAGGACATTGTTGGGTTGAGGGAGACAACTCAGCCTCTAGCATTGATTCAAAGTCATTTGGACCAATTCCTTTAGGCCTAATTCGGGGAAGGGCTACCCATGTTGTGTGGCCTCCTCAAAGAATAGGAGCTGTCAAGAGTACTCCACCACCACAAAGATTATGTTCTGCATTGGAATAA 519 0.4432 MGSSSFLWSCTKKFVTAAVITVTVSDRYVTVVPVRGGSMSPTLNPKTGSPMGDVFDDYVLVEKFCLWKYKFSNGDVVVYRSPTNHKETHIKRIAALPGEWHGTHDKSDVIQIPSGHCWVEGDNSASSIDSKSFGPIPLGLIRGRATHVVWPPQRIGAVKSTPPPQRLCSALE* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01428 172 CDD S26_SPase_I 31 145 IPR019533 GO:0004252|GO:0006465
Phac8g01428 172 Gene3D Umud Fragment, subunit A 26 161 - -
Phac8g01428 172 SUPERFAMILY LexA/Signal peptidase 29 158 IPR036286 -
Phac8g01428 172 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac8g01428 172 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac8g01428 172 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Phac8g01428 172 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 167 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Phac8g01428 172 FunFam Mitochondrial inner membrane protease subunit 25 163 - -
Phac8g01428 172 Pfam Signal peptidase, peptidase S26 108 150 IPR019533 GO:0004252|GO:0006465
Phac8g01428 172 Pfam Signal peptidase, peptidase S26 10 99 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01428 Phac-Chr8 11220018 11222734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01428 39 162 MADS-box Gene Family AT1G29960 39.231 3.00e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01428 K09648 - gmx:100527429 296.589