Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01427 ATGAGATTGTCCTACAGCCCTGCTGCTCAGTTCTTCCTTTTCCTGGTTCAGTGGACTGACTGTCACCTTGCTGGAGCCTTAGGATTGCTCAGAATTCTAATATACAAGGCATATGAAGATGGGAAGACAACCATTTCCATTTACGAAAGAAAAGCCAGTCTAAAGGAGTTCTATGGTATGGTATTTCCCTCTTTATTGCAACTTCACAGAGGAATCACTGATGTTGAAGACCGAAAACAAAAACATCTATGTGCTACTAAGTATAAGCTTAAAGATTTGACAAGCAAAGGAAAGCTTTCTGAAGTTGACATCGAGAGAGAAGAAGAGTGTGGTATTTGCTTGGAGATGAATAGCATGGTTGTATTGCCCAACTGCTATCATTCAATGTGTATGAAATGCTACCAAGACTGGCACGCAAGATCTCAATCTTGTCCTTTCTGTCGAGACAGTCTCAAAAGAGTAAACTCTGATGATCTTTGGATCTACATTAACAGCAGTGAGATTAATGACTTGGCTTCAATCAACAAGGAGAATGCGAAAAGATTATTCATATACATAGAAAGTTTGCCTCTAAATGCCAGATCCTATATTCACCATGTCATATCATCACCACTAGTGATTGCCAATTAG 630 0.3937 MRLSYSPAAQFFLFLVQWTDCHLAGALGLLRILIYKAYEDGKTTISIYERKASLKEFYGMVFPSLLQLHRGITDVEDRKQKHLCATKYKLKDLTSKGKLSEVDIEREEECGICLEMNSMVVLPNCYHSMCMKCYQDWHARSQSCPFCRDSLKRVNSDDLWIYINSSEINDLASINKENAKRLFIYIESLPLNARSYIHHVISSPLVIAN* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01427 209 ProSiteProfiles Zinc finger RING-type profile. 110 148 IPR001841 -
Phac8g01427 209 PANTHER RING FINGER PROTEIN 41, 151 1 193 - -
Phac8g01427 209 Pfam Zinc finger, C3HC4 type (RING finger) 107 153 - -
Phac8g01427 209 ProSitePatterns Zinc finger RING-type signature. 125 134 IPR017907 -
Phac8g01427 209 SMART ring_2 110 147 IPR001841 -
Phac8g01427 209 FunFam RING/U-box superfamily protein 91 157 - -
Phac8g01427 209 SUPERFAMILY RING/U-box 99 153 - -
Phac8g01427 209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 94 158 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01427 Phac-Chr8 11215720 11218122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01427 109 187 C3H Transcription Factor Family AT2G20030 36.047 4.34e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01427 K25840 - gmx:100814293 388.267