Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01416 ATGGCATATCCAGAAATGTCGTCGAACTCAAAGCCAGCAAGGGACACCAAGGGAAAGACCATCACTTGCAAAGCTGCCGTGGCTTATGGTCCCGGAGAACCCCTCGTGGTGGAAGAAATTCTTGTTCATCCTCCTCACAAATCCGAGGTTCGAATCAAAATCCTCCACACTTCCATTTGCCACACCGATCTTAGTGCATGGCGAGGCGAGAACGAGTCTCAGCGTGCTTACCCTCGTATATTGGGCCATGAAGCATCCGGGGTTGTGGAGAGTGTAGGCGAAGGGGTGAGTGAGGTGGAGGAAGGGGACATAGTGGTGCCAATTTTCAATGGGGAGTGTGGAGAGTGTTGCTACTGCAAGTGTGAGAAGAGCAACTTGTGTGAGAGGTATGGGGTGAACCCCATGAAGAAGGTGATGGAAGAAGATGGCAGAAGCAGATTCTCAACAGTTGATGGAAAACCCATCTTCCATTTCTTGAACACTTCCACATTCTCGGAGTACACGGTGGTGGATTCCGCATGTGTCGTCAAGTTTCGTCACTCCGATCACGGTCTCACCACCAAAAACCTCACCTTGCTCAGCTGTGGCGTCTCCACAGGGGTTGGAGCTGCTTGGAATACAGCCAATGTGCATTCTGGTTCATCAGTGGCTATTTTTGGTCTAGGAGCTGTTGGGTTAGCTGTTGCAGAAGGAGCACGAGCCAGAGGTGCTTCCAGAATAATAGGTGTCGACATCAACCCTGATAAATTCATCAAAGCCCAAGCAATGGGAGTCACTGATTTCATAAACCCAAAGGATGAAGAGAAGCCCGTGTGCGAGGTTGCCATTTTCTGTCATCTCATTTCACAAAATAAAGTTTCATACGCATGCATTTTCACCAACAAAACAGTAACTACGTTGTTTTTTTGCAGAGAATACAAAAAATGA 927 0.4811 MAYPEMSSNSKPARDTKGKTITCKAAVAYGPGEPLVVEEILVHPPHKSEVRIKILHTSICHTDLSAWRGENESQRAYPRILGHEASGVVESVGEGVSEVEEGDIVVPIFNGECGECCYCKCEKSNLCERYGVNPMKKVMEEDGRSRFSTVDGKPIFHFLNTSTFSEYTVVDSACVVKFRHSDHGLTTKNLTLLSCGVSTGVGAAWNTANVHSGSSVAIFGLGAVGLAVAEGARARGASRIIGVDINPDKFIKAQAMGVTDFINPKDEEKPVCEVAIFCHLISQNKVSYACIFTNKTVTTLFFCREYKK* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01416 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 189 274 IPR036291 -
Phac8g01416 308 PANTHER ALCOHOL DEHYDROGENASE 18 276 - -
Phac8g01416 308 Gene3D - 200 275 - -
Phac8g01416 308 FunFam alcohol dehydrogenase 1-like isoform X1 31 199 - -
Phac8g01416 308 Gene3D - 26 199 - -
Phac8g01416 308 SUPERFAMILY GroES-like 16 219 IPR011032 -
Phac8g01416 308 Pfam Zinc-binding dehydrogenase 223 300 IPR013149 -
Phac8g01416 308 Pfam Alcohol dehydrogenase GroES-like domain 48 176 IPR013154 -
Phac8g01416 308 FunFam S-(hydroxymethyl)glutathione dehydrogenase 200 305 - -
Phac8g01416 308 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 82 96 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01416 Phac-Chr8 11177422 11185635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01416 47 178 Monolignol Biosynthesis Gene Families AT4G39330 29.323 1.24e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01416 K00001 - gmx:100819896 405.601