Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01415 ATGGCATATCCAGAAATGTCGTCGAACTCAAAGCCAGCAAGGGACACCAAGGGAAAGACCATCACTTGCAAAGCTGCCGTGGCTTATGGTCCCGGAGAACCCCTCGTGGTGGAAGAAATTCTTGTTCATCCTCCTCACAAATCCGAGGTTCGAATCAAAATCCTCCACACTTCCATTTGCCACACCGATCTTAGTGCATGGCGAGGCGAGAACGAGTCTCAGCGTGCTTACCCTCGTATATTGGGCCATGAAGCATCCGGGGTTGTGGAGAGTGTAGGCGAAGGGGTGAGTGAGGTGGAGGAAGGGGACATAGTGGTGCCAATTTTCAATGGGGAGTGTGGAGAGTGTTGCTACTGCAAGTGTGAGAAGAGCAACTTGTGTGAGAGGTATGGGGTGAACCCCATGAAGAAGGTGATGGAAGAAGATGGCAGAAGCAGATTCTCAACAGTTGATGGAAAACCCATCTTCCATTTCTTGAACACTTCCACATTCTCGGAGTACACGGTGGTGGATTCCGCATGTGTCGTCAAGTTTCGTCACTCCGATCACGGTCTCACCACCAAAAACCTCACCTTGCTCAGCTGTGGCGTCTCCACAGGGGTTGGAGCTGCTTGGAATACAGCCAATGTGCATTCTGGTTCATCAGTGGCTATTTTTGGTCTAGGAGCTGTTGGGTTAGCTGTTGCAGAAGGAGCACGAGCCAGAGGTGCTTCCAGAATAATAGGTGTCGACATCAACCCTGATAAATTCATCAAAGCCCAAGCAATGGGAGTCACTGATTTCATAAACCCAAAGGATGAAGAGAAGCCCGTGTGCGAGAGAATACAAAAAATGACTGATGGAGGTGTAGACTACAGTTTTGAATGTACTGGAAACGTGGATGTTCTAAGGGATGCGTTTTCGTCTGTTCATGCGGGTTGGGGATTGACTGTAATATTGGGAATTCATGCCTCACCAAGCTTGCTTCCTATCCACCCGATGGAGCTCTTCAATGGGCGCAGTATCATAGGATCAATATTTGGAGGTTTCAAAGGGAAAAGTCAGTTGCCTCATTTTGCCAAACAATGTGGAAATGGAGTGGTGAAGTTGGATAATTTCATCACTCACGAGCTACCCATTGAGGAGATAGACAAAGCCTTCGATCTTTTGATCACAGGGAAATCACTGAGATGTCTTCTGCACTTCTAA 1188 0.4798 MAYPEMSSNSKPARDTKGKTITCKAAVAYGPGEPLVVEEILVHPPHKSEVRIKILHTSICHTDLSAWRGENESQRAYPRILGHEASGVVESVGEGVSEVEEGDIVVPIFNGECGECCYCKCEKSNLCERYGVNPMKKVMEEDGRSRFSTVDGKPIFHFLNTSTFSEYTVVDSACVVKFRHSDHGLTTKNLTLLSCGVSTGVGAAWNTANVHSGSSVAIFGLGAVGLAVAEGARARGASRIIGVDINPDKFIKAQAMGVTDFINPKDEEKPVCERIQKMTDGGVDYSFECTGNVDVLRDAFSSVHAGWGLTVILGIHASPSLLPIHPMELFNGRSIIGSIFGGFKGKSQLPHFAKQCGNGVVKLDNFITHELPIEEIDKAFDLLITGKSLRCLLHF* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01415 395 Gene3D - 200 338 - -
Phac8g01415 395 FunFam S-(hydroxymethyl)glutathione dehydrogenase 200 338 - -
Phac8g01415 395 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 189 356 IPR036291 -
Phac8g01415 395 Pfam Zinc-binding dehydrogenase 223 342 IPR013149 -
Phac8g01415 395 Pfam Alcohol dehydrogenase GroES-like domain 48 176 IPR013154 -
Phac8g01415 395 SUPERFAMILY GroES-like 16 219 IPR011032 -
Phac8g01415 395 Gene3D - 26 390 - -
Phac8g01415 395 PANTHER ALCOHOL DEHYDROGENASE 18 392 - -
Phac8g01415 395 FunFam Alcohol dehydrogenase 6 26 212 - -
Phac8g01415 395 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 82 96 IPR002328 GO:0008270|GO:0016491
Phac8g01415 395 SUPERFAMILY GroES-like 345 395 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01415 Phac-Chr8 11177422 11185635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01415 47 384 Monolignol Biosynthesis Gene Families AT2G21890 25.278 1.37e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01415 K00001 - gmx:100815166 625.935