Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01412 ATGGCTTCTCACCAACAAGAACCATGGCTATTGGAGAATGGAAACCCGAAGGTGTTGACCAGGGAAATGAGACATGGACGCACTGCGCACAGCAAGTCCTCCAACTCACTTCGCAAGAAGTCTGATCGCACTCTTGTCTCCAAGGTTCCCTGTGCTACTCTTCGAAACGTGCTTCTCAACTTGCAAGAGGTTATTCTTGGCACCAAGCTTTCCATTCTCATCCCTGCCATTCCTGCTGCCATTGTTGCTGAGTACTGTGGCTTTGGAAGACCTTGGGTTTTTATGTTGAGCTTACTTGGACTTACCCCACTTGCTGAACGTGTGAGCTTCATCACTGAACAAGTAGCCTTCTACACAGGTCCCACAGTTGGAGGACTTCTGAACGCGACGTGTGGGAATATTACTGAGCTCATAATAGCAATATTTGCCCTTAGCAGTAACAAAATTGCTGTGGTCAAGTTTTCTCTGTTGGGATCTATTCTTTCAAACCTTCTTCTGGTTCTTGGCACCTCTCTATTGTGTGGTGGCATTGCAAACGTTAGAGTGGAACAAAAATATGATAGAAGACAAGGAGATGTGAACTCACTTATGCTGCTGTTGGGACTGTTGTGCTACTTACTTCCTATGCTGTTCAAATATAGCGCTGCCTCAGCTGCACTCACGGTTGATCCTTCACTCCATTTGTCAAGAGCTTCTAGCATTGTGATGCTGATTGCATATGCTGTTTACATTATCTTTCAACTCTGGACACACAGGCGGTTATTTGAAGCTGAAGATGAGGATGAAGATGACAACAATGGTTCAGAGGAAGAAGCTGTCATTGGACTCTGGAGTGGCATTGCTTGGCTGATTGGGATGACTGTATTCATTGCTTTGTTGTCTGAATATGTGGTGGAAACAATTGAGGATGCATCAGATTCATGGGGTTTGTCTGTGAGCTTCCTCAGCATAATCTTGCTACCGATAGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAGCTGGACATCTCATTGGGTGTTGCATTGGGTTCAGCAACTCAGATTGCCATGTTTGTGGTCCCTTTATGTGTGATCGTTGCTTGGATAATGGGTATCAAAATGGATTTGAACTTCAATCTCCTAGAGACAGGTTCCGTTGCTTTGGCAATAATAGTCACAAGCTTCACTTTACAGGATGGTACTTCTCACTACATGAAAGGCCTTATTCTCCTGCTGTGCTACATAGTTATTGGAGCTTGCTTCTTCGTACAAAGAACACCCTTTAACCAAGGTGATGTTACAAACGTCATGCCTAAACCAGCCATTAATGCAGTTCTAAGTGCTTAG 1347 0.4432 MASHQQEPWLLENGNPKVLTREMRHGRTAHSKSSNSLRKKSDRTLVSKVPCATLRNVLLNLQEVILGTKLSILIPAIPAAIVAEYCGFGRPWVFMLSLLGLTPLAERVSFITEQVAFYTGPTVGGLLNATCGNITELIIAIFALSSNKIAVVKFSLLGSILSNLLLVLGTSLLCGGIANVRVEQKYDRRQGDVNSLMLLLGLLCYLLPMLFKYSAASAALTVDPSLHLSRASSIVMLIAYAVYIIFQLWTHRRLFEAEDEDEDDNNGSEEEAVIGLWSGIAWLIGMTVFIALLSEYVVETIEDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDISLGVALGSATQIAMFVVPLCVIVAWIMGIKMDLNFNLLETGSVALAIIVTSFTLQDGTSHYMKGLILLLCYIVIGACFFVQRTPFNQGDVTNVMPKPAINAVLSA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01412 448 FunFam Vacuolar cation/proton exchanger 121 265 - -
Phac8g01412 448 FunFam Vacuolar cation/proton exchanger 267 423 - -
Phac8g01412 448 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 24 427 IPR004713 GO:0006812|GO:0008324|GO:0016020
Phac8g01412 448 NCBIfam calcium/proton exchanger 56 422 - -
Phac8g01412 448 NCBIfam calcium/proton exchanger 74 422 IPR004798 GO:0006816|GO:0015369
Phac8g01412 448 Pfam Sodium/calcium exchanger protein 280 417 IPR004837 GO:0016020|GO:0055085
Phac8g01412 448 Pfam Sodium/calcium exchanger protein 92 249 IPR004837 GO:0016020|GO:0055085
Phac8g01412 448 Gene3D - 121 277 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01412 Phac-Chr8 11155717 11159646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01412 1 427 Antiporters AT2G38170 69.954 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01412 K07300 - gmx:100816231 739.569