Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01346 ATGAGGACCCGTTTAGCTTCCACGCGGGTCATCATCATCGCCTCTCTCTGTTTCCTTGCAAGCATGAAATTGGAAGCCAAAACCACCGACCCCTACAAGGTTCTTGGGGTTGATAAAAATGCAAGTCAGCGGGAAATTCAGAAGGCTTTCCACAAGCTATCTCTCCAGTATCACCCTGACAAGAACAAAGCCAAGAGTGCGCAAGAGAAGTTTGCTCAGATCAATAATGCGTATGACATTTTATCTGATGAAGAGAAGAGAAAGAATTATGACATGTATGGAGATTTAAATGACAATCCTGGATTTCAAGGAGGCCATCCTGGATTTCAAGGTGGCCATCCTGGAGGTAGGGGTGGATATACTTATTTTACAGGGGGTGACTGGCAGGGAGGATCTAAGTCATTCTCCTTTTCCTCTGGCGGCTCGGGTGGTTCAAATTCTTTTGGTATTGGCTTGGATAATATTTTTGGCAGTATTTTTGGTGGTGGAGGTGGTGGGAGTATGTTTGGTGGTGGAGGTGGAGGGAGTATGTTTGGTGGTTTTGGCAGTTCAGCTAATACTGAACGGGCGTCCTCAGTTTCTCCCCAACGTCTTACATCAATAAATTCACATATCTACAAGAAAGAGATAGAAAATGCAGGGATGACTTGGATTTTATTGTCTTATAGACCTACGAGTGCATCGAAGCATGTCCAATTCTTTGAATCCACTATAGAGGAGGTTGCCAGTTCATTACAGGGAGCTGTGAAGGTTGGAAGCATTAACTGTGATAAGGAAGTCTCATTCTGTAAAGAGCTTGGCATATATCCACACAAAGCTCCTAGAATTTTTGTTTTTTCATACAAGGAGGATGGAATTGGTTCTTTGGTGGAGTACAGTGGACACTTGGCTGCTAAGAATTTGAAGGCTTTCATTCAAGAACACTTGCCAAGGTTTTCCAAGCGAACCAACTTGAATAGTCTTGACCAATTCGGCACTACGGCAAAGTTGCCTAGGGTGCTTCTTCTCTCCACTAAGAAGGACACTCCAGTAATTTGGCGTGTTCTTAGTGGCTTGTATCACAAACGCATTACTCTCAGTGATGCAGAGGTGCATGATCTTTCTGATCCAAGAGTAAAAAATCTAGGAGTTGATGCACTTCCATCGATTGTTGGTTGGCTACCTAATGGAGAAAAACGTGTTCTGAAAACTGGGATTTCTGTAAAAGATTTAAAATCGGCAGTTCTCGGTCTTAGTAAAATACTTGATAATTTTGAAGAATCAAGTAAAAAGCAAGCATCAGGTCAGGCCAAGAAGGCACAAACTGATCCAGACGACGGACGCATACCATTGCTTTCTCAATCAAACTTTGAGGCTCTCTGTGGTGAGAGAGCTCCTCCTGTCTGCATAATTGGTGCCTTCAGATCTTCCAAAGCCAGAGAAAAGTTAGAATCAATCCTCTCTTTGGTCTCCCAAAAATCTTTGTCAAGACGACCAAATGGTGGAAGCAGCAGCTCTAGGGACTCCATTTCTTATGCTCTTTTAGATGCTGCAAAGCAACAGTCATTTCTAAATGCATTTGACAAAACAGGTTATAAATCATCAAATAAGTTGTTGATTGCTTACAAACCTCGTAGAGGAAAGTACAGTGTATTTAGGGGTGAAATGACAATGGAGGAAGTAGAAAGTTTCATTGCCTCCGTTCTGAGTGGAGATATATCCTTCACAGAAACGCGTTGGAAACCTGTACTAGAGCATTAG 1740 0.4259 MRTRLASTRVIIIASLCFLASMKLEAKTTDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNKAKSAQEKFAQINNAYDILSDEEKRKNYDMYGDLNDNPGFQGGHPGFQGGHPGGRGGYTYFTGGDWQGGSKSFSFSSGGSGGSNSFGIGLDNIFGSIFGGGGGGSMFGGGGGGSMFGGFGSSANTERASSVSPQRLTSINSHIYKKEIENAGMTWILLSYRPTSASKHVQFFESTIEEVASSLQGAVKVGSINCDKEVSFCKELGIYPHKAPRIFVFSYKEDGIGSLVEYSGHLAAKNLKAFIQEHLPRFSKRTNLNSLDQFGTTAKLPRVLLLSTKKDTPVIWRVLSGLYHKRITLSDAEVHDLSDPRVKNLGVDALPSIVGWLPNGEKRVLKTGISVKDLKSAVLGLSKILDNFEESSKKQASGQAKKAQTDPDDGRIPLLSQSNFEALCGERAPPVCIIGAFRSSKAREKLESILSLVSQKSLSRRPNGGSSSSRDSISYALLDAAKQQSFLNAFDKTGYKSSNKLLIAYKPRRGKYSVFRGEMTMEEVESFIASVLSGDISFTETRWKPVLEH* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01346 579 ProSitePatterns Nt-dnaJ domain signature. 71 90 IPR018253 -
Phac8g01346 579 SUPERFAMILY Thioredoxin-like 195 310 IPR036249 -
Phac8g01346 579 SUPERFAMILY Chaperone J-domain 26 127 IPR036869 -
Phac8g01346 579 Gene3D DnaJ domain 27 169 IPR036869 -
Phac8g01346 579 SMART dnaj_3 29 86 IPR001623 -
Phac8g01346 579 PANTHER DNAJ PROTEIN ERDJ3A 1 578 - -
Phac8g01346 579 ProSiteProfiles dnaJ domain profile. 30 94 IPR001623 -
Phac8g01346 579 Coils Coil 64 84 - -
Phac8g01346 579 PRINTS DnaJ domain signature 32 50 IPR001623 -
Phac8g01346 579 PRINTS DnaJ domain signature 86 105 IPR001623 -
Phac8g01346 579 PRINTS DnaJ domain signature 50 65 IPR001623 -
Phac8g01346 579 PRINTS DnaJ domain signature 66 86 IPR001623 -
Phac8g01346 579 Gene3D Glutaredoxin 199 310 - -
Phac8g01346 579 Pfam DnaJ domain 30 91 IPR001623 -
Phac8g01346 579 CDD PDI_a_family 230 305 - -
Phac8g01346 579 CDD DnaJ 30 83 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01346 Phac-Chr8 10344111 10347823 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01346 32 93 C2H2 Transcription Factor Family AT1G74250 39.706 9.49e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01346 - - gmx:100796871 776.163