Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01342 ATGGAGTGCATCAGCCCTACCTCTTGTGAAGGGTCATCATCCAAGAACAAGAGCAAGGAGAAAAAGGGTGTGAAGAAAGGCAACAAGGGAGGGGTGAAGCTTTCCACTGATCCACAAAGCGTGGCAGCCAGAGAAAGAAGGCACAGAATCAGTGACAGGTTTAAGATCCTTCAGAGCATGGTCCCTGGTGGGAGCAAGATGGACACAGTGTCCATGTTGGAGGGAGCCATTCACTACGTCAAGTTCCTCAAATCCCAGATTTGGCTCCACCAAGCATTGATAAACTTTCTAGATATTGATCATCATGAGGCTCCCGTGAACCTCCCTGCAGAGTATAATCTCCCTCATGAACATACCATCCCTCTTCAGCAAAACCCTTCTTCAGTTTCGGTGCATTCTCAGCAGAGTCTACCACAGCCACCACTAGCACAGTGCTGCTTCCAAGGTGAAGAAGATTGCAACACCTTTGATGCCACTATGAAATATTGGCCAGCTTAG 498 0.4819 MECISPTSCEGSSSKNKSKEKKGVKKGNKGGVKLSTDPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEGAIHYVKFLKSQIWLHQALINFLDIDHHEAPVNLPAEYNLPHEHTIPLQQNPSSVSVHSQQSLPQPPLAQCCFQGEEDCNTFDATMKYWPA* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01342 165 MobiDBLite consensus disorder prediction 1 47 - -
Phac8g01342 165 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 21 146 IPR045843 GO:0003700|GO:0006355
Phac8g01342 165 CDD bHLH_AtIND_like 35 94 - -
Phac8g01342 165 FunFam Transcription factor LAX PANICLE 37 101 - -
Phac8g01342 165 Gene3D - 39 91 IPR036638 GO:0046983
Phac8g01342 165 SMART finulus 40 89 IPR011598 GO:0046983
Phac8g01342 165 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 39 99 IPR036638 GO:0046983
Phac8g01342 165 Pfam Helix-loop-helix DNA-binding domain 44 83 IPR011598 GO:0046983
Phac8g01342 165 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 34 83 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01342 Phac-Chr8 10288231 10289295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01342 24 129 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 45.872 1.02e-23 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac8g01342 HLH 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01342 - - gmx:113000114 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g01342 8 10288231 10289295 Phac8g01342 8 10288231 10289295 ECH