Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01338 ATGACTACTCCCTTGGCTTACCAAGAACACCTTCCTGCAGCACCCGAATGGCTGAACAAAGGGGACAACGCTTGGCAGTTAACAGCAGCAACTCTTGTTGGTCTACAGAGCATGCCTGGTCTTGTGATTCTCTATGCCAGCATAGTGAAGAAAAAATGGGCTGTTAATTCAGCTTTCATGGCTCTCTATGCCTTTGCAGCAGTTCTCCTATGTTGGGTGCTTGTGTGTTACCGGATGGCCTTTGGGGAGAAACTTTTCCCCTTCTGGGGTAAGGGTGCCCCAGCACTAGGCCAAAAGTTTCTTACAAAACGAGCCATAGTTACTGAAACCATCCATCGCTTTGATAATGGGACTGTTGAGAGCCCTGCTGAAGAACCCTTTTACGCCATGGCCTCACTTGTCTATTTCCAATTCACTTTTGCTGCTATTACTCTCATCTTGTTGGCTGGCTCTGTCCTTGGCCGAATGAACATCAAGGCATGGATGGCTTTTGTGCCTCTTTGGCTAATCTTTTCTTACACTGTTGGGGCTTTCAGTCTCTGGGGTGGTGGCTTTCTCTACCAATGGGGTGTCATAGATTACTCTGGTGGCTATGTCATCCACCTTTCCTCTGGAATCGCTGGTTTAACTGCTGCTTATTGGGTTGGACCAAGGTTGAAGAGTGACAGGGAGAGGTTTCCACCAAACAATGTGCTGCTCATGCTTGCAGGTGCAGGGTTGTTGTGGATGGGGTGGTCAGGGTTCAATGGAGGAGCACCATATGCTGCAAATCTTACATCTTCAATTGCAGTGCTGAACACAAACATTTGTGCAGCGACAAGTCTCCTTGTATGGACAACTTTGGATGTCATTTTCTTCGGGAAACCTTCTGTGATTGGAGCTGTGCAGGGCATGATGACTGGACTTGTATGCATCACACCAGGAGCAGGGCTTGTGCAATCGTGGGCTGCTATAGTGATGGGAATATCATCTGGGAGCATTCCATGGGTCACCATGATGATTTTGCATAAAAAGTCAACCTTGTTGCAAAAGGTGGATGACACCCTTGGTGTGTTTCACACTCATGCTGTGGCGGGGCTTTTGGGTGGTCTCCTCACAGGTCTCTTTGCAGAACCAGTTCTGTGTAGGTTACTATTGCCAATTTCTAACTCAAGGGGTGCATTCTATGGTGGAGATGGTGGCATGCAATTCGTGAAGCAACTAGTGGCAGCCCTGTTTGTGATTGGATGGAACTTGGTCTCCACCACTATCATTCTTCTTTTCATAAAATTGTTCATACCCTTGAGGATGCCGGACGAGCAGCTGGAGATCGGTGACGATGCCGTCCACGGAGAGGAAGCCTATGCCCTGTGGGGTGATGGAGAAAGATATGACCCAACTAGGCATGGCTCCTTGCACACTTCCAACTCTGCTGTATCACCTTATGTCAATGGTGCAAGAGGGGTGACTATAAACTTATGA 1461 0.4812 MTTPLAYQEHLPAAPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLVCYRMAFGEKLFPFWGKGAPALGQKFLTKRAIVTETIHRFDNGTVESPAEEPFYAMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYQWGVIDYSGGYVIHLSSGIAGLTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANLTSSIAVLNTNICAATSLLVWTTLDVIFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGISSGSIPWVTMMILHKKSTLLQKVDDTLGVFHTHAVAGLLGGLLTGLFAEPVLCRLLLPISNSRGAFYGGDGGMQFVKQLVAALFVIGWNLVSTTIILLFIKLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGERYDPTRHGSLHTSNSAVSPYVNGARGVTINL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01338 486 ProSitePatterns Ammonium transporters signature. 193 218 IPR018047 GO:0008519|GO:0016020|GO:0072488
Phac8g01338 486 PANTHER AMMONIUM TRANSPORTER MEP2 10 458 IPR001905 GO:0008519|GO:0016020|GO:0072488
Phac8g01338 486 FunFam Ammonium transporter 6 451 - -
Phac8g01338 486 PRINTS Rhesus blood group protein signature 263 285 IPR002229 GO:0005886
Phac8g01338 486 PRINTS Rhesus blood group protein signature 137 153 IPR002229 GO:0005886
Phac8g01338 486 PRINTS Rhesus blood group protein signature 232 250 IPR002229 GO:0005886
Phac8g01338 486 Gene3D Ammonium transporter AmtB like domains 3 451 IPR029020 -
Phac8g01338 486 NCBIfam ammonium transporter 22 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
Phac8g01338 486 Pfam Ammonium Transporter Family 24 448 IPR024041 GO:0008519|GO:0016020|GO:0072488
Phac8g01338 486 SUPERFAMILY Ammonium transporter 17 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01338 Phac-Chr8 10262381 10267236 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01338 130 486 Inorganic Solute Cotransporters AT2G38290 78.552 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01338 K03320 - gmx:100790119 909.442