Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01305 ATGAGAGGTAAGGGAGGGCCTCAGAACTCCGATTGCAAGTTCAGAGGTGTGAGGCAGAGAATTTGGGGAAAATGGGTTGCTGAGATTCGCGAGCCAATCAATGGAAAGCTTGTGGGTGAAAAAGCAAATAGGCTTTGGCTTGGTACTTTCTCCACTGCACTTGAAGCTGCTCTTGCTTATGATGAAGCTGCCAAGGCCATGTACGGCCCCTCTGCCCGTTTGAATTTTCCCGAGCCTTCTGTGGAGCCAGTAGACTCTAATGGATCATCATCTAGTGGATGTGATAAAAAATCACCAAGTGATTCTTCGGAAAATGACGGTGATGTTGCAAAAGCTGAGTTGGAAAGGAACCTTCATCAGCCTCATGAAGAGAAACCAAGGTTTTCTGAGATTGGTGTCTTTGAGGTAACAGAAGAGAAACAGGTTCTTTCAGGAGGTTGTGTCGCTGATGACTCAATAGAGGAGTTGAAGGAAACGACAACTGGATTTGAACAATGTCAAATAACTTTGAAGAATATTAAGTCTGAAATGCCTGAAAAAAGTGAAGGAATAGACAGAGAATTGGAGAGGGTTTTGAAAAATTCTGGGATAGGTGAAAAGGGTAATAATCTCTTGCAAAAGGAGCCGGTGGAGATAGCCATGAATACAGGAGCTAACTACTGCAGCTCTTCTGATGCTGCTGAACATGACGTTGTGGAGAAGAGTGAAGAAACAAGAGCAGAATCAGTTGAAACTTTGAAATCATGTGAGTTAAGCTGCAGCAACCATTGCCTTGGATATATGCATAACATGCTGCCAGATAGCAATACAAGACCACATTCTGAGTACTTTAATAACATCCAAACTGAGGCATCTATAGCAAGAAAACATACCGAGGAAGTAATTTCTGAAATCCTGGGACTATGTCACAGCAAGTGCTTAAAGATTAGTCATGATCAGACACCACATGAGCCTTATAGAACTGAACATTTTGATGAGATGAGAACTAAGCTTAAGTGTTTGGAATGCAAGCTGAAAGCACATTCTATTCATTACAAGAATCAGGCACCAATAGTTGGGGATTCCAATTATCCTTCAATGCAGGGAATTCATATGTTTGGTGGTGGCACTGTTGGACCAATTGAAAGCATGTCCCAAATTGATGCTATGAACAACATCAACACAAGCAGAAATTCCCTACCTGGATTTAGTTCTGGCCATAGTAGGAAGTTGTGTGATCTTTCTCAACAGCTACACAAACTTGGTGGTTACCTTCCTGAGCATTGGAATAATATGCAGTTTGCAGACTTGGAAGTGGGTTATGATTATAGCTTCTTAAATCCTGATTATGATTTTGGCTTATTGGAAGAGCAAAAGTTACTTGATGTATGCTTTCCACAAATACGATCTTAG 1392 0.4138 MRGKGGPQNSDCKFRGVRQRIWGKWVAEIREPINGKLVGEKANRLWLGTFSTALEAALAYDEAAKAMYGPSARLNFPEPSVEPVDSNGSSSSGCDKKSPSDSSENDGDVAKAELERNLHQPHEEKPRFSEIGVFEVTEEKQVLSGGCVADDSIEELKETTTGFEQCQITLKNIKSEMPEKSEGIDRELERVLKNSGIGEKGNNLLQKEPVEIAMNTGANYCSSSDAAEHDVVEKSEETRAESVETLKSCELSCSNHCLGYMHNMLPDSNTRPHSEYFNNIQTEASIARKHTEEVISEILGLCHSKCLKISHDQTPHEPYRTEHFDEMRTKLKCLECKLKAHSIHYKNQAPIVGDSNYPSMQGIHMFGGGTVGPIESMSQIDAMNNINTSRNSLPGFSSGHSRKLCDLSQQLHKLGGYLPEHWNNMQFADLEVGYDYSFLNPDYDFGLLEEQKLLDVCFPQIRS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01305 463 SMART rav1_2 13 83 IPR001471 GO:0003700|GO:0006355
Phac8g01305 463 MobiDBLite consensus disorder prediction 77 108 - -
Phac8g01305 463 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 1 289 - -
Phac8g01305 463 Pfam AP2 domain 12 69 IPR001471 GO:0003700|GO:0006355
Phac8g01305 463 MobiDBLite consensus disorder prediction 82 98 - -
Phac8g01305 463 FunFam Ethylene-responsive transcription factor 2 12 78 - -
Phac8g01305 463 CDD AP2 12 78 IPR001471 GO:0003700|GO:0006355
Phac8g01305 463 SUPERFAMILY DNA-binding domain 13 77 IPR016177 GO:0003677
Phac8g01305 463 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Phac8g01305 463 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Phac8g01305 463 Gene3D AP2/ERF domain 12 78 IPR036955 GO:0003700|GO:0006355
Phac8g01305 463 ProSiteProfiles AP2/ERF domain profile. 13 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01305 Phac-Chr8 9933843 9936275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01305 7 99 AP2-EREBP Transcription Factor Family AT5G05410 64.516 2.44e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac8g01305 AP2 3.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01305 - - gmx:100500303 702.205