Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01280 ATGACCATGGGTGATCATAATAACAACTGGGGAACTTCTGAATTTAATCATCATCAAGTTGGACTTCTTGATGTTCCAAAATTCAAGTCTGCTCAACCTCCCTCACTACCCCTCTCTCCCTCTCCAGCCTCCCCTTCTTCTTACTTGGCTTTTTCGTCTGCTTTCAGCCCATCTGAGTTCTTCAACTCTTCTTTGTTTTCTCCTTCTCCAAATATTTTTGCATCTCCTACTACTGAGGCTTTGGCTGGCCAGACCTTCAACTGGAGGAACGGTTCAGGAGAAGAACAACAACGTGACAAGGAGGATGAGAAAAACTACTCGGACTTCTCTTTCCAAACTCAAATTCAATCTTCCTCAGGCATGTTTCAAGTGCAGGAACCACTTAAGAAACAAGATATATGGAAATTCAATGAACCTTCAAAGCGAACTGATTTTTCATCTGATAGGACAGCAACAAAATCTGAATACCCTTCAATTCAGAGCTTTTCCACAGAAATGGCATCAGATAAATCAGAATTACAAAGCAATTCAGTTCCTGGATCTAGTCGTTTTGATTACGCCAATGCATCTCAGTCTGTTAGAGAACAAAAGAGATCAGAAGATGGGTTCAACTGGAGAAAATATGGACAGAAACAAGTGAAAGGGAGTGAAAATCCTCGTAGTTATTATAAGTGCACACATCCAAATTGCTCAGTGAAGAAGAAAGTAGAGATGTCTTTGGATGGCCAAATTACTGAAATAGTGTACAAGGGCCATCATAACCACCCAAAACCACAGTCTACTAGAAGAACAAACTCTCAATCAATTCATCAACCTTCTTCATCTTGCACAAACTCGGGGATTTCTGATCAATCAGTGGTGACCCTAGGCAATCCACAAATGGATCATTTCTCCATGCAGGAAGATTCTTCAGCTTCCGTAGGAGAGGAAGAGTTTGAGCAAACATCCCAAACCAGTTATTCTGGGGGAGATCAAGATAACCTTGGACCAGAGGCCAAACGATGGAAAGGAGATAATGAAAATGATGACTATTCCGCCTCAGGGAGTAGAACTGTGAGAGAGCCTAGAGTTGTAGTTCAAACCACAAGCGAAATTGATATACTTGATGATGGCTTTAGGTGGAGGAAATATGGACAGAAAGTAGTGAAAGGAAATCCAAATGCAAGGAGCTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGAAAACATGTTGAGAGAGCTGCACATGATATCAAAGCTGTGATCACAACTTATGAAGGGAAACACAACCATGATGTGCCTGCTGCACGTGGTAGCGCAAGTTATAACATGAACAGAAATTCTCTGAACAGCAACATATCGGCTCCTATAAGACCCTCGGCAGTGAACTGTTATTCTAGCTCATCAGGTTTCAAAAATTCTCTCTACGATAGTACCAGGCTTCCAGCAACCGCAAATCAAGAATCGTTTTCACAGGACAGGTTCCAGCACCCAGGAAGTTTTGGCCATTCGGCTCTTAACAAATCAATGGGTTCATATACCGATCATGCACCATACTCAGATGCTGCACACTCAAATGCCAAGGATGAGAAGAAGGATGACTCCTTCCTTCAGTCATTCCTGTCAAAGGACTTCTAA 1620 0.4216 MTMGDHNNNWGTSEFNHHQVGLLDVPKFKSAQPPSLPLSPSPASPSSYLAFSSAFSPSEFFNSSLFSPSPNIFASPTTEALAGQTFNWRNGSGEEQQRDKEDEKNYSDFSFQTQIQSSSGMFQVQEPLKKQDIWKFNEPSKRTDFSSDRTATKSEYPSIQSFSTEMASDKSELQSNSVPGSSRFDYANASQSVREQKRSEDGFNWRKYGQKQVKGSENPRSYYKCTHPNCSVKKKVEMSLDGQITEIVYKGHHNHPKPQSTRRTNSQSIHQPSSSCTNSGISDQSVVTLGNPQMDHFSMQEDSSASVGEEEFEQTSQTSYSGGDQDNLGPEAKRWKGDNENDDYSASGSRTVREPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAAHDIKAVITTYEGKHNHDVPAARGSASYNMNRNSLNSNISAPIRPSAVNCYSSSSGFKNSLYDSTRLPATANQESFSQDRFQHPGSFGHSALNKSMGSYTDHAPYSDAAHSNAKDEKKDDSFLQSFLSKDF* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01280 539 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 109 445 IPR044810 GO:0003700
Phac8g01280 539 FunFam WRKY transcription factor 33 355 421 - -
Phac8g01280 539 FunFam WRKY transcription factor 188 259 - -
Phac8g01280 539 MobiDBLite consensus disorder prediction 329 349 - -
Phac8g01280 539 SMART WRKY_cls 199 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g01280 539 SMART WRKY_cls 368 427 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g01280 539 MobiDBLite consensus disorder prediction 251 352 - -
Phac8g01280 539 SUPERFAMILY WRKY DNA-binding domain 360 428 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g01280 539 MobiDBLite consensus disorder prediction 260 325 - -
Phac8g01280 539 Gene3D WRKY domain 185 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g01280 539 ProSiteProfiles WRKY domain profile. 363 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g01280 539 SUPERFAMILY WRKY DNA-binding domain 195 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g01280 539 ProSiteProfiles WRKY domain profile. 194 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g01280 539 Pfam WRKY DNA -binding domain 369 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g01280 539 Pfam WRKY DNA -binding domain 200 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Phac8g01280 539 Gene3D WRKY domain 355 421 IPR036576 GO:0003700|GO:0006355|GO:0043565
Phac8g01280 539 MobiDBLite consensus disorder prediction 139 222 - -
Phac8g01280 539 MobiDBLite consensus disorder prediction 150 193 - -
Phac8g01280 539 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01280 Phac-Chr8 9419523 9422796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01280 23 460 WRKY Transcription Factor Family AT2G38470 51.111 7.05e-113 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Phac8g01280 WRKY 1.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01280 K13424 - gmx:100776837 885.945