Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01251 ATGGCTTTTAGTGACAAAAGAAGAGCGTCTCTGGAACAGACTTTGCAACAACTTCGCGATGTCACAAACTCCACTGCTCTGAACAAAGCCTCAATCATTGTAGATGCCTCAAAATACATAGAGGAGTTGAAACAAAAGGTGGAGGGACTGAACTCGGAGCTGGGGATCACGGAATCATCATCAAACTCTCAAATTGATGAACTACCTACGGTAACGGTGAAAACCCTAAAAAAGGGTTTCCTCATTAATGTGCTTTTGGAGAAGAATAGCCCTGGTATGCTCGTGTCTATACTCGAAGCCTTCGAAGAACTTGGTCTTGATGTACTTGATGCTAGGGTTTCTTGTGAAGACAGCTTCCAGCTAGAAGCTGTGGGAAGAGAAAGTCACAAGAACGACAGTGTTGACGCGCAAGTGGTAAAGCAAGCAGTGTTGCGAGCAATCAAGAACGAGGACTAA 456 0.4452 MAFSDKRRASLEQTLQQLRDVTNSTALNKASIIVDASKYIEELKQKVEGLNSELGITESSSNSQIDELPTVTVKTLKKGFLINVLLEKNSPGMLVSILEAFEELGLDVLDARVSCEDSFQLEAVGRESHKNDSVDAQVVKQAVLRAIKNED* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01251 151 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 6 148 - -
Phac8g01251 151 Coils Coil 33 60 - -
Phac8g01251 151 CDD ACT_UUR-ACR-like 88 147 - -
Phac8g01251 151 Gene3D - 4 75 IPR036638 GO:0046983
Phac8g01251 151 ProSiteProfiles ACT domain profile. 82 151 IPR002912 -
Phac8g01251 151 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 58 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01251 Phac-Chr8 9031014 9033075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01251 25 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 28.777 1.59e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01251 - - vra:106759069 268.47