Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01222 ATGAGTTTCCGAGAGGGAAAGTTAGGAGAAGAGAGGGAATGTGAAGAATCGGTCTTGGGGATCACTGAATCCAAATCAGTGAGGGAAAATGGGTCATTGACAGCCACACAGCTAACAATTGATGAGAATCTATTGGTTGACCCTAAACTACTCTTCATTGGGTCCAAGATTGGTGAAGGAGCTCATGGTAAAGTTTATGAAGGAAGGTATAGAGATCAAATTGTTGCAATCAAAGTTCTGCATCGTGGGAGCACTTCCGAAGAAAGAGCTTCCCTTGAAAATCGTTTTGCTCGAGAAGTTAATATGATGTCTCGTGTCCACCACGACAATCTTGTTAAGTTTATTGGAGCATGTAAGGATCCTCTTATGGTAATAGTTACAGAGTTATTACCAGGGATGTCACTGCGTAAATATTTAATGAGTATCCGTCCTAAACTATTAGACCTTCATTTGGCCATCAACTTTGCTCTTGATATTGCTCGAGCCTTGGATTGGCTACATGCCAATGGAATCATACACAGAGATCTGAAACCTGACAATCTGTTGCTTACAGCGGACCAGAAGTCTGTTAAACTTGCAGATTTTGGCCTCGCAAGAGAAGAAACTGTGACTGAAATGATGACTGCAGAAACAGGAACTTACCGTTGGATGGCACCAGAGTTGTACAGTACTGTGACTTTGCGTCAGGGAGAGAAAAAGCACTACAACAACAAGGTTGATGTATATAGCTTTGGAGTTGTTCTATGGGAGCTACTAACAAACCGCATGCCATTTGAAGGGATGTCCAATTTGCAGGCTGCTTATGCTGCTGCATTTAAGATTGTAGCAAGAGAGGCCCTGCATTCCAGATGA 852 0.4249 MSFREGKLGEERECEESVLGITESKSVRENGSLTATQLTIDENLLVDPKLLFIGSKIGEGAHGKVYEGRYRDQIVAIKVLHRGSTSEERASLENRFAREVNMMSRVHHDNLVKFIGACKDPLMVIVTELLPGMSLRKYLMSIRPKLLDLHLAINFALDIARALDWLHANGIIHRDLKPDNLLLTADQKSVKLADFGLAREETVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGVVLWELLTNRMPFEGMSNLQAAYAAAFKIVAREALHSR* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01222 283 Pfam Protein kinase domain 55 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01222 283 ProSitePatterns Protein kinases ATP-binding region signature. 57 78 IPR017441 GO:0005524
Phac8g01222 283 Gene3D Phosphorylase Kinase; domain 1 39 130 - -
Phac8g01222 283 CDD STKc_MAP3K-like 57 273 - -
Phac8g01222 283 SMART serkin_6 51 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01222 283 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 271 - -
Phac8g01222 283 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Phac8g01222 283 Gene3D Transferase(Phosphotransferase) domain 1 132 282 - -
Phac8g01222 283 SUPERFAMILY Protein kinase-like (PK-like) 43 269 IPR011009 -
Phac8g01222 283 FunFam Kinase suppressor of Ras 1 40 130 - -
Phac8g01222 283 ProSiteProfiles Protein kinase domain profile. 51 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01222 Phac-Chr8 8646650 8651257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01222 39 273 MAP Kinase Kinase Kinase AT5G01850 79.151 3.79e-147 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phac8g01222 Pkinase 3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01222 - - pvu:PHAVU_008G083700g 544.273