Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01190 ATGAGTTCTGATGAGTCATTGCTATTGGAATCGGATCCGCGTCCTGTGATTCATCACCGCCGCGGGAAATCGGGTTCCCGGACCTACCTCTGTGGCCATGGTTCCTTCTCGTCTTCGGTGTTCGAGGCGGCTCTTGCTGACATCAGCGATTTGGATGTGAAGGAACGAAACAAGGAGGCTGTTTTGTCTAGCGATTGCAGCTTCCACCCTGCGTCGTTTAGTAATAGTAATAGCTCTGATACGTGTGCTGTTGAGTCGAAGTTCCCCTGGCAGTTTCCCTTGGAATGCCCCACGCGCGAGAGGAGGCGGTCTGCATCGTGGGGTGCAATGGAACTGCACGATGCTGATAACCGGAGCGTGCCCTTTGAGATATCCGGAGCTTCGTCTCATGTGCAGGATAGGTTGAATAGTAAATCTCAGAGGATTAGGCACAAGAGTGTGCAGTTTGATGATCCTGCTTTTCAGGAGGATGGTGCCAGGTTGATCTATATCAATGATCCCAGGAAGACCAACGACAAGTATGAGTTCACCGGGAATGAGATCCGAACTAGTAGATACACCTTTGTTACCTTTTTGCCCAAGAATCTTTTCATTCAGTTTCATAGGGTTGCGTATCTGTATTTCCTTGCTATTGCAGCGCTCAATCAACTTCCTCCACTGGCTGTCTTTGGGAGGACTGTGTCTCTTTTCCCTCTGTTGTTTGTGCTTTGTGTCACGGCTATTAAGGATGGCTATGAGGATTGGCGGCGGCACAGGTCAGATCGCAATGAAAACAACCGGGAGTCTTTGGTGCTTCAGTCTGGTGATTTCCGATCGAAGAAGTGGAAAAAAATACAAGCTGGGGAGGTTGTTAAGATCTTTGCTGATGAGACAATTCCGGCTGATATGGTCTTGTTGGGGACGAGTGATCAAAGTGGGCTTGCCTATATTCAGACCATGAATTTGGATGGAGAGTCAAATTTGAAGACAAGGTATGCTAGGCAGGAAACAGCTTCGGTGGTTGCTTCGGAAACTTGTGATGTTTTTGGGGTAATTAGGTGCGAGCAACCGAACCGGAATATTTATGAGTTCACTGCCAACATGGAGTTCAATGGACTTAAGTTTTCCCTTAGCCAGTCAAACATTGTTCTGCGTGGCTGCCAGCTGAAGAACACGGATTGGATAATTGGTGTTGTAGTTTATGCCGGACAGGAAACAAAAGCAATGCTGAACAGTGCAGCTTCTCCATCCAAGAGAAGCAGACTTGAATGTTACATGAACAGAGAAACCCTTTGGTTGTCTGTTTTTCTTTTTATCATGTGTTTGGTTGTGGCCCTTGGGATGTGTCTTTGGCTGGTACGCCACAATAACCAGCTCGATACCTTGCCTTACTACAGAAAAAGGTACTTCACCAACGGACCCGATAATGGAAAGAGATACAAGTATTATGGGATTCCGATGGAAGCATTTTTCTCCTTTTTGAGTTCTGTTATAGTGTTTCAGATAATGATACCAATATCACTTTATATCACAATGGAGTTGGTTCGATTGGGTCAGTCATACTTTATGATTGAAGACAGGGATATGTATGATGCCAGCTCTGGGTCAAGGTTTCAGTGTAGATCATTAAATATAAACGAAGATTTGGGTCAAATACGCTATATATTTTCGGACAAGACTGGAACACTCACAGAAAACAAAATGGAATTCAGGAGGGCTAGCGTACATGGGAAAAATTATGGGAGCTCCTTGCCTATGGTTGATAATACAGCCGCTGCGGATGTTACTCCTAAACGCAGATGGAAGCTCAAATCTGAAATTGCAGTGGATTCTGAACTGATGATAATGTTGCAGGGAAACTCAGATAGAGAAGAAAGAGTTTCTGGTCATGAGTTTTTTCTTACACTGGCTGCTTGTAACACTGTAATCCCTATACATGGTGATGATGGGCTTTCCAGTTGTGGAACAAATGGATTAAATGAAGATATTAGACGCATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCAGCCTCTGCTTATGGATATACTCTTTTTGAACGTACATCAGGACATATTGTTATTGACGTCAACGGTGAGAAACTCAGATTGGATGTATTGGGTCTGCATGAGTTTGATAGTGTGCGAAAGAGAATGTCTGTTGTTATTCGGTTTCCTGACAATGCGGTAAAGGTGTTAGTCAAAGGTGCTGATTCTTCAATGTTTAGCATTTTGGAAAATGGCAGAGAGAGTAACAATAGCATACAGCACACAACTCAGAGCCATTTGAATGAATATTCTTCAGAAGGTTTGCGCACTCTTGTAATTGGCTCCAGGGATCTTTCTGATGCTGAACTTGAGGAGTGGCAAAGCCGGTATGAAGAGGCAAGTACTTCGTTGACTGACAGAGCTACTAAGCTAAGGCAAACAGCAGCTCTTATAGAAAGCAATTTAAAGTTACTTGGAGCAACTGGAATTGAGGACAAGCTACAGGAGGGTGTACCAGAAGCCATTGAGGCTCTACGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACAGCAATTTCAATTGGTCTTTCCTGTAAACTTCTTAGTGGAGATATGCAGCAGATTATTATAAATGGCACCTCAGAGGTCGAATGTAGAAATCTTTTGGTTGATGCTAAAGCCAAATATGGTGTGAAATCTTCAAGTGGAGGTCGTCGGAGTTTGAAACACAAAACCAATGCTGGACATGGTGATCTTCTTGATATTCCCAATGGCTTTCCCAAATGGACTCCTGGAAAGGAAGAGGGAACTATTGCTCCATTGGCACTTATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAGGAATTGGAGTCAGAGCTTTTCGATCTAGCAATTTCCTGCAGGGTTGTGCTTTGCTGCCGTGTTGCACCCTTGCAAAAGGCAGGAATTGTTGATCTGATCAAGAGCCGCACAGATGATATGACACTGGCCATAGGCGATGGGGCCAATGACGTGTCAATGATCCAAATGGCAGATGTTGGTGTAGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCAATGGGACAGTTTCAGTTTTTAAAAAAATTACTTCTGGTCCATGGGCACTGGAATTATCAGCGGGTTGGCTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTGTTGATGTATATATTATGTACGGCTTTTTCTACAACTTCTGCGTTGACAGATTGGAGTAGTGTTTTCTATTCTGTGATCTACACATCTGTTCCTACTATTATTGTTGGTATTCAGGATAAGGACTTGAGTCATAGGACACTCTTGCAGTATCCAAAACTGTATGGTTCAGGTCACAGGCAAGAAGCTTACAATATGCAATTATTTTGGATCACTATGATTGACACAGTGTGGCAGAGCCTTGTTCTTTTCTACATCCCATTGTTCACCTATAAGGACAGTTCAATTGACATATGGAGCATGGGCAGTTTGTGGACAATTGCAGTTGTTATCCTTGTAAATGTGCACCTTGGTATGGACATCAACCGTTGGGTATTAATCACTCACGTTGCCATCTGGGGATCAATAATCATTACATATGGTTGCATGGTGATATTGGATTCTATACCTGTCTTTCCCAATTACTGGACTATTTATAATCTGGCAAGGTCCCCTACATATTGGGTAACAATTTTGCTTATAATTATTGTGTCATTGCTCCCTCGCTTCATTTGCAAAGTTGTCTATCAAATTTTTTGGCCTTCGGATATCCAGATAGCTAGAGAAGCTGAGTTAATGAGAAAACGACAGGCTAATTTGCGGCCAAGGCAACAAGTTTCCAGTTAA 3870 0.4331 MSSDESLLLESDPRPVIHHRRGKSGSRTYLCGHGSFSSSVFEAALADISDLDVKERNKEAVLSSDCSFHPASFSNSNSSDTCAVESKFPWQFPLECPTRERRRSASWGAMELHDADNRSVPFEISGASSHVQDRLNSKSQRIRHKSVQFDDPAFQEDGARLIYINDPRKTNDKYEFTGNEIRTSRYTFVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSKKWKKIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETASVVASETCDVFGVIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLECYMNRETLWLSVFLFIMCLVVALGMCLWLVRHNNQLDTLPYYRKRYFTNGPDNGKRYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDASSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTENKMEFRRASVHGKNYGSSLPMVDNTAAADVTPKRRWKLKSEIAVDSELMIMLQGNSDREERVSGHEFFLTLAACNTVIPIHGDDGLSSCGTNGLNEDIRRIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNAVKVLVKGADSSMFSILENGRESNNSIQHTTQSHLNEYSSEGLRTLVIGSRDLSDAELEEWQSRYEEASTSLTDRATKLRQTAALIESNLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQETAISIGLSCKLLSGDMQQIIINGTSEVECRNLLVDAKAKYGVKSSSGGRRSLKHKTNAGHGDLLDIPNGFPKWTPGKEEGTIAPLALIIDGNSLVYILEKELESELFDLAISCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMYILCTAFSTTSALTDWSSVFYSVIYTSVPTIIVGIQDKDLSHRTLLQYPKLYGSGHRQEAYNMQLFWITMIDTVWQSLVLFYIPLFTYKDSSIDIWSMGSLWTIAVVILVNVHLGMDINRWVLITHVAIWGSIIITYGCMVILDSIPVFPNYWTIYNLARSPTYWVTILLIIIVSLLPRFICKVVYQIFWPSDIQIAREAELMRKRQANLRPRQQVSS* 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01190 1289 FunFam Phospholipid-transporting ATPase 661 805 - -
Phac8g01190 1289 PRINTS P-type cation-transporting ATPase superfamily signature 549 563 - -
Phac8g01190 1289 PRINTS P-type cation-transporting ATPase superfamily signature 998 1017 - -
Phac8g01190 1289 Gene3D - 559 574 IPR023299 GO:0000166
Phac8g01190 1289 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 555 831 IPR023299 GO:0000166
Phac8g01190 1289 CDD P-type_ATPase_APLT_Dnf-like 178 1155 - -
Phac8g01190 1289 Pfam Phospholipid-translocating ATPase N-terminal 162 227 IPR032631 -
Phac8g01190 1289 MobiDBLite consensus disorder prediction 1 24 - -
Phac8g01190 1289 SFLD C1.7: P-type atpase like 533 1049 - -
Phac8g01190 1289 Pfam Phospholipid-translocating P-type ATPase C-terminal 1026 1263 IPR032630 -
Phac8g01190 1289 SUPERFAMILY Calcium ATPase, transmembrane domain M 176 1262 IPR023298 -
Phac8g01190 1289 NCBIfam HAD-IC family P-type ATPase 482 572 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac8g01190 1289 NCBIfam HAD-IC family P-type ATPase 964 1081 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac8g01190 1289 NCBIfam HAD-IC family P-type ATPase 808 866 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phac8g01190 1289 NCBIfam phospholipid-translocating P-type ATPase 176 1270 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Phac8g01190 1289 SFLD p-type atpase 533 1049 IPR044492 -
Phac8g01190 1289 Gene3D - 235 405 - -
Phac8g01190 1289 Gene3D - 546 558 IPR023214 -
Phac8g01190 1289 Gene3D - 532 545 - -
Phac8g01190 1289 Pfam E1-E2 ATPase 260 507 - -
Phac8g01190 1289 SUPERFAMILY Calcium ATPase, transduction domain A 259 401 IPR008250 -
Phac8g01190 1289 FunFam Phospholipid-transporting ATPase 814 1038 - -
Phac8g01190 1289 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 146 1275 - -
Phac8g01190 1289 Gene3D - 661 797 IPR023299 GO:0000166
Phac8g01190 1289 Gene3D - 814 1038 IPR023214 -
Phac8g01190 1289 FunFam Phospholipid-transporting ATPase IC 546 558 - -
Phac8g01190 1289 Pfam Cation transport ATPase (P-type) 653 739 - -
Phac8g01190 1289 SUPERFAMILY HAD-like 536 1042 IPR036412 -
Phac8g01190 1289 ProSitePatterns E1-E2 ATPases phosphorylation site. 551 557 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01190 Phac-Chr8 8437938 8450647 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01190 139 1272 Primary Pumps ATPases AT5G04930 56.769 0.0 1319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01190 K14802 - gmx:100789830 2316.58