Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01184 ATGGCTTCTCTGCTTCCTACAACCGCAACAACACTTCAACATAATCGCACCATCTGCTTCTCTCCTCTCAAACTCAACATCCCAATTACCATTTCCTTCTCAACAAACCGTTTCAAGAGTAGCTCTGGAAAGTGCAATGCAGTTTTTGGTAACATTCCCAAAGACTTGTTGGAGACCACTTTTCACGTGGACCACTTTTCTGTCTTCCAATCACTGTTAGTCAAGTTTCAGAATGTAACTGAAGATTTATCAGACATGCAGAGGTGGGGGTTTGTGATACTTGCAGGGCTGACATGGGCCTATTTAACTGCAAGGCCGGGTGTTCTTGTCGGCGCCATTGATGCATTCCTTTTGGCCCCTATGCAACTGGTTTTGGACAGTGTATTTGGAAGGAGAAATTTCAAGAGTACTGATTTTCTTATTGGAAATAAACTAGGAGAAGGGTCATTTGGTATTGTTTATTCAGGTGTTTTGGTCCCAAAGAATGTAGATGTACAAGAGTGGATGCAAAAAAATGGAAGAGGCAAGGTCACAAAGTTGGATGCCAAATCTAAGGATAAAGTCATTCTTAAAAAGGTAAAGGTTGGAATTGAAGGGGCAGAGGAATTTGGTGATTTTGAGGAGTGGTTCAATTACAGACTCTCTAGAGCAGCTCCTGAAACATGTGCCAAGTTTCTTGGAAGTTTTGTAGCTGACAAAGCCAATTCACAGTTCACAAAAGGTGGAAAATGGCTAGTTTGGAAGTTTGAGGGAGGGCGCTCTCTTGCTGATTACATGGCTGATCAAAGCTTCCCATCGAACTTAGAGTCTACCATGTTTGGACGTGTCTTGCAGGGTGTAGACTCTTCAAAACGAAATGCATTGATCATCAAGCAAATAATGCGCCAGATCATTACTTCTCTTAAGAAAATTCACGACACTGGAATTGTTCATAGGGATCTTAAGCCTGCCAACTTGGTAGTTACCGAACGGGGGCAGATTAAACTCATCGATTTTGGTGCTGCAACAGACCTTAGAATTGGAAAGAATTATGTTCCCAATCGTACCCCTTTGGATCGTGACTACTGTCCCCCTGAACTGTATGTTCTACCAGAAGAAACCACGAGTCTTCCACCAGAGCCAATTGCAGCTTTCCTTTCACCAATCATGTGGCAGTTAAACAGTCCTGATCTGTTTGATATGTATTCTGCTGGGATTGTACTCTTACAAATAGCAATTCCAACCTTAAGGTCTTCAGCTGCTTTGAAGAATTTCAATTTGGAGATAAGAACATGTGGATATGATTTAAACAAATGGAGAGCGTCTACTCGCATGAGGTCTGACTTCCAAATTCTTGATAGTGACTCTAGAAGAGGTTGGGACTTGGCAACAAAGCTTATCTCCAAGAGAGGTTCCCAATTAAGAGGACGTTTATCTGCTGCTGCTGCTTTGAGGCATCCTTATTTCCTTCTGGGTGGGGATCAGGCCGCCGCAGTCCTTTCAAAACTAAGCTTTTAA 1497 0.4255 MASLLPTTATTLQHNRTICFSPLKLNIPITISFSTNRFKSSSGKCNAVFGNIPKDLLETTFHVDHFSVFQSLLVKFQNVTEDLSDMQRWGFVILAGLTWAYLTARPGVLVGAIDAFLLAPMQLVLDSVFGRRNFKSTDFLIGNKLGEGSFGIVYSGVLVPKNVDVQEWMQKNGRGKVTKLDAKSKDKVILKKVKVGIEGAEEFGDFEEWFNYRLSRAAPETCAKFLGSFVADKANSQFTKGGKWLVWKFEGGRSLADYMADQSFPSNLESTMFGRVLQGVDSSKRNALIIKQIMRQIITSLKKIHDTGIVHRDLKPANLVVTERGQIKLIDFGAATDLRIGKNYVPNRTPLDRDYCPPELYVLPEETTSLPPEPIAAFLSPIMWQLNSPDLFDMYSAGIVLLQIAIPTLRSSAALKNFNLEIRTCGYDLNKWRASTRMRSDFQILDSDSRRGWDLATKLISKRGSQLRGRLSAAAALRHPYFLLGGDQAAAVLSKLSF* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01184 498 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 40 497 - -
Phac8g01184 498 SMART serkin_6 139 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01184 498 ProSiteProfiles Protein kinase domain profile. 139 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01184 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Phac8g01184 498 SUPERFAMILY Protein kinase-like (PK-like) 136 483 IPR011009 -
Phac8g01184 498 Pfam Protein kinase domain 289 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01184 498 Gene3D Phosphorylase Kinase; domain 1 127 249 - -
Phac8g01184 498 Gene3D Transferase(Phosphotransferase) domain 1 278 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01184 Phac-Chr8 8402842 8407700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01184 270 496 EF-hand Containing Proteins AT4G21940 28.870 8.44e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Phac8g01184 Pkinase 2.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01184 - - gmx:100795624 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g01184 8 8402842 8407700 Phac8g01184 8 8402842 8407700 ECH