Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01176 ATGATGCTACAGTCCTACTTTACAACAATTCCAATTTTCCTACTCCTGCTTGTGTTTCCTCAAACTAAAGCTGATCTACACTCAGAAAAGCAAGCCCTTCTTGATTTTGCTGCTGCACTTCATCATGCTCCAAGACTCAATTGGAATTCTAGTACCTCAATCTGCACTTCATGGATGGGAGTTACATGTAATCATGATGGGTCCCATGTGCTTTCTGTGAGGCTTCCAGGTGTGGGACTGCGCGGTTCTCTTCCACCAAACACTCTTAGTAAGCTTAATGGCCTCATTAGTCTCAGTCTTAGGTCCAACAGCTTGAGGGGGAACCTTCCAACTGACCTACTTTCCCTTCCTTCTCTGCGCTTTGTATATCTCCAACACAACCACTTCTCAGGTCATATTCCTGATTCTCTGCCACCCCGGCTTATCTTTCTTGATCTGTCCTATAACTCTTTCACAGGAAAAATTCCAGCCTCAATCCAAAACTTGACACATCTAATAGGACTCAACCTCCAAAACAACTCTCTCACAGGATCTATTCCTGATGTTAACCTTCCTAGCCTTAAGAATTTGGATTTGAGCTTCAACTACTTGAATGGTTCTATTCCTTCATATTTCTGCAAGTTTCCTGGCTCCTCATTTAGAGGGAATTTGAAATTATGTGGAGCACCTTTGAAACAATGTTCTTCACTTTCCACTTCTACCACATTGTCTCCCTCAACAGTCTCTCAAAGACCAAGTGATCCATCAAACAGGAACATGAGAAAGGGGGCAAAACTAGCAATTATTTTGGGGGTTGTCACATTGCTGTTTCTTCCAGGTCTTATGGTAGCGTTTTGCTGTTTCAAGAAAAAAGTTGGTGAACAAAATGTTGCGCCTACAGAGAAAGGTCAGAAGCTTAAGGAGGACTTTGGTAGTGGTGTGCAAGAACCTGAGAGAAACAAGCTTGTATTCTTCGAAGGTTGTTCTTATAATTTTGATCTGGAGGACTTGTTAAGAGCTTCAGCAGAGGTGCTTGGGAAGGGAAGTTGTGGAACCACATATAAAGCCATCTTGGAGGATGGAACAACAGTGGTTGTCAAGAGGTTAAAAGAGGTGGCTATGGGGAAAAAAGAATTTGAACTGCAAATGGAGATTGTCCAAAGACTTGATCACCACCCAAATGTGATTCCCCTTCGTGCTTACTACTATTCCAAAGATGAAAAACTAATGGTTTACGACTACTCCACAGCCGGAAGTTTTTCCAAGTTATTGCATGGAACCAGGGAAACTGGACGAGCTCCACTAGATTGGGATTCAAGATTGAAGATCGTGGTTGGAGCTGCAAGGGGCGTTTGTCATATTCACTCAGCCAATGGAAGGAAACTTGTCCATGGCAACATAAAATCATCTAATGTGATTCTCACGATAGATCTCCAGGGATGTATATCAGATTTTGGCCTAACTCCCCTAACAAATTTCTGTGCCTCCTCTAGAAGTCCCGGCTATGGAGCACCTGAAGTTATTGAAACAAGAAAGTCCACTCAAAAATCTGATGTGTACAGCTTTGGTGTTCTCCTTCTTGAGATGCTAACTGGCAAAACACCAGTTCAGTATTCAGGGCATGATGAAGAGGTTGATCTTCCAAAGTGGGTCCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGTTAATGAGGTATCCAAACATTGAAGATGAACTTGTACAGATGCTACAACTGGCAATGGCATGTGTAGCAGTGATGCCAGACTCAAGACCCTCAATGGTGGAAGTTGTTAAAACAATTGAAGAAATTACAGCTTGTATTTATTAA 1824 0.4227 MMLQSYFTTIPIFLLLLVFPQTKADLHSEKQALLDFAAALHHAPRLNWNSSTSICTSWMGVTCNHDGSHVLSVRLPGVGLRGSLPPNTLSKLNGLISLSLRSNSLRGNLPTDLLSLPSLRFVYLQHNHFSGHIPDSLPPRLIFLDLSYNSFTGKIPASIQNLTHLIGLNLQNNSLTGSIPDVNLPSLKNLDLSFNYLNGSIPSYFCKFPGSSFRGNLKLCGAPLKQCSSLSTSTTLSPSTVSQRPSDPSNRNMRKGAKLAIILGVVTLLFLPGLMVAFCCFKKKVGEQNVAPTEKGQKLKEDFGSGVQEPERNKLVFFEGCSYNFDLEDLLRASAEVLGKGSCGTTYKAILEDGTTVVVKRLKEVAMGKKEFELQMEIVQRLDHHPNVIPLRAYYYSKDEKLMVYDYSTAGSFSKLLHGTRETGRAPLDWDSRLKIVVGAARGVCHIHSANGRKLVHGNIKSSNVILTIDLQGCISDFGLTPLTNFCASSRSPGYGAPEVIETRKSTQKSDVYSFGVLLLEMLTGKTPVQYSGHDEEVDLPKWVQSVVREEWTAEVFDLELMRYPNIEDELVQMLQLAMACVAVMPDSRPSMVEVVKTIEEITACIY* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01176 607 ProSiteProfiles Protein kinase domain profile. 332 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01176 607 Pfam Protein kinase domain 335 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01176 607 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 408 605 - -
Phac8g01176 607 SUPERFAMILY L domain-like 44 223 - -
Phac8g01176 607 PANTHER OS05G0588300 PROTEIN 12 602 - -
Phac8g01176 607 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Phac8g01176 607 SUPERFAMILY Protein kinase-like (PK-like) 336 599 IPR011009 -
Phac8g01176 607 FunFam pollen receptor-like kinase 1 300 407 - -
Phac8g01176 607 Gene3D Ribonuclease Inhibitor 27 139 IPR032675 -
Phac8g01176 607 Gene3D Transferase(Phosphotransferase) domain 1 409 605 - -
Phac8g01176 607 MobiDBLite consensus disorder prediction 230 252 - -
Phac8g01176 607 Gene3D Phosphorylase Kinase; domain 1 299 407 - -
Phac8g01176 607 MobiDBLite consensus disorder prediction 230 250 - -
Phac8g01176 607 Gene3D Ribonuclease Inhibitor 140 229 IPR032675 -
Phac8g01176 607 FunFam Probable inactive receptor kinase RLK902 26 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01176 Phac-Chr8 8340871 8344462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01176 24 602 Receptor kinase-like Gene Family AT5G58300 60.884 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Phac8g01176 Pkinase 4.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01176 - - var:108321341 1137.48