Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01163 ATGCCTGCTCTGAGAATTCATGGATATGCCTTGGCTGTTTCGTTTTGTCTTATCACCTTCATAGCAGCATCACAACGAACAGACCCTTCAGAAGTTAATGCGCTGATAGACATCAAGAAAAGTTTGATTGATCCTAAGAACAATCTTAAGAACTGGAATAAAGGAGACCCATGTGCAAGAAACTGGACTGGAGTTTGGTGTTTTGATAAGAAGGGAGAGGATGGGTATTTCCATATTCGTGAGATCTACTTAATGACAATGAATCTTTCGGGAAGTCTATCACCTCAGCTTGGTCAGCTATCCCATCTTGAGATAATGGATTTCATGTGGAACAATCTGACAGGACCGATACCAAAGGAGATTGGAAATATCAAAACATTGAAACTCTTGCTCCTGAATGGCAATATGTTATCGGGGAGTTTACCAGACGAGCTTGGCAACCTTCCAAATATAAATAGATTCCAAGTAGACGAAAACCAATTGTCTGGTTCTATACCAGAGTCACTTGCCAACATGATTAGTGTTAAACACCTTCACCTGAACAACAACTCATTTAGTGGTCAACTTCCATCCACACTTTCAAAGCTGTCAAATCTGATGCATTTGCTTGTGGACAACAATAACTTATCTGGCAATCTTCCACCAGAATACTCCATGTTAAATGGTTTGGCAATACTCCAGCTTGATAACAACAACTTCAGCGGCAATGGAATTCCTTCTACCTATGCAAACTTAACCAGGCTAGTGAAATTAAGTCTAAGAAACTGCAGTCTGCAAGGAGCTGTTCCTGATTTCAGTTCAATTTCCAATCTTGCCTATTTAGATCTTAGCTGGAATCAGTTCACTGGACCCTTACCGTCAAATAAACTGTCAGACAATATGAATACTATTGATCTGTCCAATAATCATCTCAACGGATCTATTCCTCGAAGCTACTCTTATCCTCATCTTCAAAAATTGTCACTTGCAAACAATTTACTGTCGGGGTCCATCCCTGCTAGCATATGGCAGAATATGTCCTTCAGTGTGAAGGATAAACTTATAATTGATCTCCATAACAACTCGTTTGAGGATGTTCTGGGAAATCTGAACCCCCCGGCAAATGTTACCTTGAGGCTTTCTGGTAATCCTATATGCAAGAATTCTAACACACAAAATGTTGGTCAATATTGTGGACCTGAAGGAGATAGGGCAGCCCAAGACTTAACAAACTCTACTGACTGTCCTGTTCAATCTTGTCCAGTGGATGAATTTTATGAATACGCCCCTTCTTCCCCAGTTCCTTGCTTTTGTGCGGCACCTCTGAGAATTGGATACAGGCTGAAAAGTCCAAGTTTTTCTTACTTTGCTCCCTATAGATCTAGATTTGAACACTACATAACTGACTCCTTAAAATTACACCTCTACCAACTATCAGTAGATTCGGTTGCTTGGGAAAAGGGACCTCGTCTTAGAATGTATCTGAAACTCTTCCCTTCCTATAATGATTCCCGTTCTAATGTGTTCAACGTAAGTGAGGTCCTTCGCATTAGCAGCATATTTACATCATGGCGATTTCCTCGCACTGATTTTTTTGGACCATATGAACTCCTGAACTTCACTCTTCTTGGACCTTATGAAAATTTAATTATTGGTTCGGAGAAGGCAAAAGTTAGTGTTGGCATAAAAGTTGCTGTTGTAATAGCAGCTGCTGCTTGTGCTTTAGCAATATCTGCTATAATCATTCTCCTGATTACTAGAAGAAAGATGAAATACCAGAAGAAGATTTCCAGGAAACCTACTAGTATATCTATCAAAATAGATGACATGAAAGCATTTACTTACAAAGAACTGGCTCTTGCTACTAACAAATTTAATATCTCGACTAGAGTTGGTCAAGGAGGTTATGGGAATGTCTATAAAGGCATTTTATCTGATGAAAGCTTTGTGGCCGTTAAGCGAGCAGAAGCAAGTTCCTTACAAGGACAAAGGGAGTTCTTGACTGAGATTGAGCTTTTGTCAAGGTTACACCATCGAAATCTTGTCTCGTTGATTGGATACTGTAATGAAGAAGGGGAGCAGATACTGGTTTATGAATTCATGCCCAATGGCACCCTAAGGGACTGGATTTCTGGTAGAAGAAGAAAAACCAGGGGGAGCCTAAATTTTAGTATGAGGTTGAGAATTGCAATGGGAGCAGCCAAAGGCATACTGTATCTGCATACAGAGGCTAACCCTCCTATATTCCACAGAGATATTAAAGCCAGTAACATTCTTCTGGACTCCAAGTTCACAGCTAAAGTGGCCGATTTTGGACTGTCACGGCTTGTACCAGACTTAGATGAAGAAGGAACTGCTCCTAAATATGTGTCAACAGTTGTGAGAGGAACTCCAGGTTACCTGGACCCAGAATATTTGTTGACTCATAAGCTGACAGACAAATGTGATGTCTATAGCCTGGGAATTGTGTATCTAGAGCTTTTAACAGGCATGCAACCAATATCTCATGGGAAAAACATTGTCCGCGAGGTTAACATGGCTCTTCAATCCGGCACAGTATATTCCATCATAGACAGCACAATTGGGTTGTACACATCTGAATGCTTGGACAAATTCTTAACTCTGGCCCTCAGTTGTTGCCAAGACAATCCAGAGGAAAGACCATCAATGGTAGATGTGGTGAGGACACTGGAAGATATCATTGCAATGTTGCCCGAAGCTGAAACTATTTTCTCAGATGTTAGCTTAGACAGTTCTGGCAACATAGCACCACCCTCATCATCAGCATCAACAACAGGATCTCATGTAATAAGGGAGGAGCAAAACATGTCCTCATATGTGTCAGGAAGCGATCTTGTCAGTGATGTCATTCCCACCATTGTTCCTCGCTGA 2871 0.4089 MPALRIHGYALAVSFCLITFIAASQRTDPSEVNALIDIKKSLIDPKNNLKNWNKGDPCARNWTGVWCFDKKGEDGYFHIREIYLMTMNLSGSLSPQLGQLSHLEIMDFMWNNLTGPIPKEIGNIKTLKLLLLNGNMLSGSLPDELGNLPNINRFQVDENQLSGSIPESLANMISVKHLHLNNNSFSGQLPSTLSKLSNLMHLLVDNNNLSGNLPPEYSMLNGLAILQLDNNNFSGNGIPSTYANLTRLVKLSLRNCSLQGAVPDFSSISNLAYLDLSWNQFTGPLPSNKLSDNMNTIDLSNNHLNGSIPRSYSYPHLQKLSLANNLLSGSIPASIWQNMSFSVKDKLIIDLHNNSFEDVLGNLNPPANVTLRLSGNPICKNSNTQNVGQYCGPEGDRAAQDLTNSTDCPVQSCPVDEFYEYAPSSPVPCFCAAPLRIGYRLKSPSFSYFAPYRSRFEHYITDSLKLHLYQLSVDSVAWEKGPRLRMYLKLFPSYNDSRSNVFNVSEVLRISSIFTSWRFPRTDFFGPYELLNFTLLGPYENLIIGSEKAKVSVGIKVAVVIAAAACALAISAIIILLITRRKMKYQKKISRKPTSISIKIDDMKAFTYKELALATNKFNISTRVGQGGYGNVYKGILSDESFVAVKRAEASSLQGQREFLTEIELLSRLHHRNLVSLIGYCNEEGEQILVYEFMPNGTLRDWISGRRRKTRGSLNFSMRLRIAMGAAKGILYLHTEANPPIFHRDIKASNILLDSKFTAKVADFGLSRLVPDLDEEGTAPKYVSTVVRGTPGYLDPEYLLTHKLTDKCDVYSLGIVYLELLTGMQPISHGKNIVREVNMALQSGTVYSIIDSTIGLYTSECLDKFLTLALSCCQDNPEERPSMVDVVRTLEDIIAMLPEAETIFSDVSLDSSGNIAPPSSSASTTGSHVIREEQNMSSYVSGSDLVSDVIPTIVPR* 957
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01163 956 Gene3D Phosphorylase Kinase; domain 1 579 693 - -
Phac8g01163 956 Gene3D Ribonuclease Inhibitor 151 220 IPR032675 -
Phac8g01163 956 Gene3D Ribonuclease Inhibitor 30 150 IPR032675 -
Phac8g01163 956 SMART serkin_6 618 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01163 956 ProSiteProfiles Protein kinase domain profile. 618 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01163 956 PANTHER RECEPTOR-LIKE PROTEIN 55 38 893 - -
Phac8g01163 956 ProSitePatterns Protein kinases ATP-binding region signature. 624 646 IPR017441 GO:0005524
Phac8g01163 956 Gene3D Ribonuclease Inhibitor 221 419 IPR032675 -
Phac8g01163 956 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 29 190 - -
Phac8g01163 956 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Phac8g01163 956 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 694 906 - -
Phac8g01163 956 CDD STKc_IRAK 624 893 - -
Phac8g01163 956 FunFam Leucine-rich repeat protein kinase family protein 581 693 - -
Phac8g01163 956 Pfam Protein kinase domain 619 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac8g01163 956 SUPERFAMILY L domain-like 44 382 - -
Phac8g01163 956 SUPERFAMILY Protein kinase-like (PK-like) 603 912 IPR011009 -
Phac8g01163 956 ProSitePatterns Serine/Threonine protein kinases active-site signature. 741 753 IPR008271 GO:0004672|GO:0006468
Phac8g01163 956 Gene3D Transferase(Phosphotransferase) domain 1 694 905 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac8g01163 Phac-Chr8 8271254 8280306 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01163 5 902 Receptor kinase-like Gene Family AT5G01950 60.221 0.0 1091
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Phac8g01163 Pkinase 1.6e-47 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01163 - - gmx:100815005 1593.17