Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01132 ATGGCTGCTTGCGCTTTGTTCAGTGGTGGCACTAACATTACCGAAGATGGCAATGTTAACAACGGGAGTGGGAGTGCTACTAGTCCTCTGACAAGTGCATCTAACTCTAGCAACATGAGCAACGAGGAGCAGCAGAACCTACATGGCATCATGCCACAGCCTCATTGTGATAGAAAGATGGTGAGGAAAAGAATGGCTTCTGAGATGGACCAAGTTAACGTTCATGTCACTCCACCACACAACGCTTCCTCCACAACTGATTATCCTAGGTTTCCTCGTAGAAGCACCACCAACATGAACATGTCATCCTTAGAAAAAGGGTCCACCACCACAGCTACGTTAGCCGCAGGTACTTGTAGTAATAGCAATAATAATAATAACAATAATAACTATCATTTTAATAATAGTAACCATAATAGTAATAGTGGAAGTATTTCGTCAAGAGATAACGTTGCCATTCCAAATTACCCCACTGTGACGGTCACAACCAACTACTCCACTATGTTGCTACCTTCTTCCACCACCATCAATTCCTCTGGTGTTGCTCCAAACTACAGTGCTCACCAACACCATCATTTCCAAGGACTTGTTGAAAGTCAAAGCCAGGACCAGCAAAACCCCGTGCCTGCAGTGTGTGGATTCTCAGGGTTACCACTTTTTCCATCTCAAAGCCAAAGGAACCGAGACAACAACACCGCCACCACCAACGTAAGAAGCAGTGGTGGAAATATTGTCGACGTCGTTGCTTCTTCTTCTTCTCCTTCCATGGATGACACTTCAGCCGCCACAAGTGGTTGGATCGATGGTATATTGAAGGATCTCATTCACAGTTCCAACAGTGTTTCGATTCCCCAGCTAATCAGCAACGTGAGGGAGATTATATACCCTTGCAACCCCAACCTTGCAACTATTCTTGAATACAGGTTGCGTCTTCTCACCGAGTCTACCCCACAAAACAAAAGAGGCACAGAAGGGGTGCCTCTTCCCCCTTCCGTGTCCTCAGTGAAGCTCATGAATAATCGTGTGGATGGCATTGTTCCTAATTTGCACTTCACAGATGCATCAGGTGGTGCTGTGGTTGTGAATCAGCACATGTTGTCCAATTGGGGTGTGCCTCCAATCACTCACCACCATGATAACAACGGCAACAACAACACCAACACCAACAGTAACCCTTCAGTTTCTTTGGTTACTTTGCCTTCACCGCCACCACCACCCCATTATTCACCCCCACAAGAGAAGCAGCCTCACCCTCAAGAGGAAGATCTAGCAGCAGCCAGCAGTGCTGAGGTGGCACTCACAAGAAAGAAGAAAGAAGAGTTGCGGGAACAGAAGAAGAAGGACGAGGAGGGACTGCATCTCCTCACCTTGCTGCTTCAGTGTGCTGAAGCAGTTTCTGCTGAGAATCTAGAAGACGCTAACAAGATGTTGCTAGAGATTTCCCAATTGTCAACACCGTTTGGCACATCAGCCCAGCGTGTGGCCGCTTATTTCTCGGAAGCCATTTCAGCAAGGTTGGTGAGTTCATGTCTGGGAATATATGCCACTTTGCCACACACCCATCAGAGTCACAAGGTGGCATCGGCTTTCCAAGTGTTCAATGGTATCAGTCCTTTCGTGAAGTTCTCACACTTCACAGCAAACCAAGCTATCCAAGAAGCTTTTGAAAGGGAAGAAAGGGTGCACATCATAGATCTGGATATAATGCAAGGGTTGCAGTGGCCTGGTTTGTTCTACATTTTAGCTTCAAGACCTGGTGGAGCCCCTTATGTGAGGCTCACGGGGCTTGGTACTTCCATGGAAGCACTCGAAGCAACGGGTAAACGTTTATCTGATTTTGCAAACAAACTTTGCCTTCCCTTTGAGTTCTTCCCAGTGGCCGAGAAAGTTGGGAACCTTGACCCTGAGAGGCTCAATGTTAGCAAAACCGAAGCTGTTGCAGTTCACTGGTTGCAACATTCCCTCTATGATGTCACCGGCTCAGACACCAACACCTTGTGGCTCTTGCAGAGGCTAGCACCTAAAGTGGTGACAGTGGTAGAGCAGGACCTAAGCAACACTGGTTCATTCTTGGGGAGGTTTGTGGAAGCCATACACTACTACTCGGCGTTGTTTGACTCTCTCGGGTCTAGCTATGGGGAGGAGAGTGAGGAGAGGCATGTGGTGGAGCAGCAGCTATTGTCTAGGGAGATTCGGAATGTGCTAGCTGTTGGGGGGCCATCGAGAACTGGGGAGCCAAAATTTCACAACTGGAGGGAGAAGTTTCAGCAGTGTGGATTTAGAGGTATATCTCTAGCTGGTAATGCTGCCACTCAAGCAAGTCTACTCCTTGGTATGTTCCCATCGGAGGGTTATACCTTGGTGGAGGACAATGGCATCCTTAAACTTGGTTGGAAGGACCTATGCTTGCTCACTGCTTCAGCTTGGAGACCTCCCTTCCATGGTGGCACTGCCATTACCCATCACAACTAG 2472 0.4786 MAACALFSGGTNITEDGNVNNGSGSATSPLTSASNSSNMSNEEQQNLHGIMPQPHCDRKMVRKRMASEMDQVNVHVTPPHNASSTTDYPRFPRRSTTNMNMSSLEKGSTTTATLAAGTCSNSNNNNNNNNYHFNNSNHNSNSGSISSRDNVAIPNYPTVTVTTNYSTMLLPSSTTINSSGVAPNYSAHQHHHFQGLVESQSQDQQNPVPAVCGFSGLPLFPSQSQRNRDNNTATTNVRSSGGNIVDVVASSSSPSMDDTSAATSGWIDGILKDLIHSSNSVSIPQLISNVREIIYPCNPNLATILEYRLRLLTESTPQNKRGTEGVPLPPSVSSVKLMNNRVDGIVPNLHFTDASGGAVVVNQHMLSNWGVPPITHHHDNNGNNNTNTNSNPSVSLVTLPSPPPPPHYSPPQEKQPHPQEEDLAAASSAEVALTRKKKEELREQKKKDEEGLHLLTLLLQCAEAVSAENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPHTHQSHKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFYILASRPGGAPYVRLTGLGTSMEALEATGKRLSDFANKLCLPFEFFPVAEKVGNLDPERLNVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKFQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHGGTAITHHN* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01132 823 MobiDBLite consensus disorder prediction 1 42 - -
Phac8g01132 823 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 414 805 IPR005202 -
Phac8g01132 823 MobiDBLite consensus disorder prediction 377 396 - -
Phac8g01132 823 MobiDBLite consensus disorder prediction 397 413 - -
Phac8g01132 823 MobiDBLite consensus disorder prediction 126 146 - -
Phac8g01132 823 Pfam GRAS domain family 455 810 IPR005202 -
Phac8g01132 823 MobiDBLite consensus disorder prediction 11 42 - -
Phac8g01132 823 MobiDBLite consensus disorder prediction 75 105 - -
Phac8g01132 823 MobiDBLite consensus disorder prediction 371 446 - -
Phac8g01132 823 MobiDBLite consensus disorder prediction 432 446 - -
Phac8g01132 823 ProSiteProfiles GRAS family profile. 445 810 IPR005202 -
Phac8g01132 823 Coils Coil 424 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01132 Phac-Chr8 7964213 7969000 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01132 436 813 GRAS Transcription Factor Family AT5G41920 55.013 5.81e-140 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac8g01132 GRAS 2.6e-122 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01132 - - gmx:100806779 1303.12