Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01117 ATGGAAGGAAGAGAAGGGATCAGTTCTGGGGTTACAGTGATAGGGGCAGAAGCTCCATCAGCCTATCATATGGCACCAAGGAGTGAAGCCCCAAGTCAGGGTGGTCCTCCTGTGCCTGAAGCACCACCTGCAGCTATTGGTGTGTCACCAGTGAGTGTGGCATTGGATGGAACATCAATCAAGAAGAAAAGGGGCAGACCAAGAAAATATGGGCCAGATGGGTTGGTGAATATGGCATTGTCACCCATGCCAATCTCATCTTCCGCCCCATTTTCTAATAATAACTTTTCATCTGGGAAGCGAGGGAGACCGCGGGGGATGGATTACAAGCCAAAGAAATTTGGAGTGGATTATCTTGGTGGCTCTGATGGTACAAGCTTTATGCCCCATATCATTACTGTCAATAGTGGCGAGGACATAGCAATGAAGATTATATCTTTTTCTCAACAAGGACCACGTGCTATATGCATCTTATCTGCTAGTGGTGTAATTTCAAATGTTACACTTCGTCAGCCTGATTCTTCTGGGGGAACTTTGACCTATGAGGGCCGTTTCGAGATACTTTCTTTGTCTGGATCATTCATGCCTACTGAAAACCAAGGAACAAGAAGCAGGTCTGGAGGGATGAGTGTTTCATTGTCAAGTCCAGATGGTCGCGTTGTAGGTGGTGGAGTTGCTGGTCTACTTGTAGCAGCAGGTCCTGTGCAGGTGGTGGTGGGAAGCTTTTTGCCGTGCAACCAGCAAGATCAGAAGCCAAAGAAGCCAAAGTCTGATTATGCATCAGCTACTGTTACCCCTCTCATTGCAGTGTCTTCTGCACCACCCTCTACCAATGGTGAAAAGGAGCTTGTCATGGGTGGACACATAATGCACAACTCAGGAACAAACCTTGCTTCTCCCTCGGCCTTTCGCCGGGAAAACTGGGTTAACATGCACTCGATAACAGACTCGATGAAGTCAGCCACTGATATTAACATATCCTTGCCTGATAGTTAA 996 0.4729 MEGREGISSGVTVIGAEAPSAYHMAPRSEAPSQGGPPVPEAPPAAIGVSPVSVALDGTSIKKKRGRPRKYGPDGLVNMALSPMPISSSAPFSNNNFSSGKRGRPRGMDYKPKKFGVDYLGGSDGTSFMPHIITVNSGEDIAMKIISFSQQGPRAICILSASGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTENQGTRSRSGGMSVSLSSPDGRVVGGGVAGLLVAAGPVQVVVGSFLPCNQQDQKPKKPKSDYASATVTPLIAVSSAPPSTNGEKELVMGGHIMHNSGTNLASPSAFRRENWVNMHSITDSMKSATDINISLPDS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01117 331 MobiDBLite consensus disorder prediction 1 49 - -
Phac8g01117 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 28 292 IPR039605 GO:0003680
Phac8g01117 331 ProSiteProfiles PPC domain profile profile. 124 265 IPR005175 -
Phac8g01117 331 FunFam AT-hook motif nuclear-localized protein 1-like 129 260 - -
Phac8g01117 331 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 242 IPR005175 -
Phac8g01117 331 SUPERFAMILY AF0104/ALDC/Ptd012-like 126 246 - -
Phac8g01117 331 CDD DUF296 129 219 IPR005175 -
Phac8g01117 331 Gene3D - 129 261 - -
Phac8g01117 331 MobiDBLite consensus disorder prediction 90 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01117 Phac-Chr8 7876256 7881133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01117 10 273 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.856 7.02e-91 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01117 - - gmx:100777213 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g01117 8 7876256 7881133 Phac8g01117 8 7876256 7881133 ECH
Phac8g01117 8 7876256 7881133 Phac10g00955 10 29722903 29729474 PCT