Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01114 ATGAGTGGTAGTGGTGCTGGTAGCAGCACCACTGGTAGCCCTTGTGGAGCTTGCAAGTTCCTCAGAAGAAAATGTATTCCGGGTTGTATCTTTGCTCCGTATTTCGATGCGGAGCAAGGAACAAACCATTTTGCTGCTGTGCACAAGGTTTTTGGGGCTAGCAATGTGTCCAAGCTTCTCCTTAGCATTCCTGTGCACAAGAGGCTTGATGCAGTCATCACCATTTGTTATGAAGCACAATCACGCCTCAGAGATCCTGTTTATGGCTGTGTTTCGCACATCTTTGCCCTTCAGCAACAGGTGGTGAACTTACAAGCAGAACTCTCATACCTACAAGGCCACCTTGCCCAAATGGAAGTACCTCATCCGCCACCACCTCCTCTAACGCAATCGGTGGTGACACCGCGATTCTCAGTGAGCGATCTACCATCGACCACCGCAATGGCAGCGGCAACCGCCACTTATGACCTGTCTTCACTTTTTGATCCAACAGGGCAAGTTTCATGGGCCATGCAACATAGGGCAATGGACCCACGTCAATACGTGGCTCATCCTCCATCAGGTTCTATTAGGGCTGAGATTCAAGCTGTGGCAGGTGACCTTTCTCATAGACATGGGTCTCCTCCATCACCTCCTGCTTCAAGCTCCAATGCTTCACCATCTCTGTCCCTTTCCAAATGA 681 0.5007 MSGSGAGSSTTGSPCGACKFLRRKCIPGCIFAPYFDAEQGTNHFAAVHKVFGASNVSKLLLSIPVHKRLDAVITICYEAQSRLRDPVYGCVSHIFALQQQVVNLQAELSYLQGHLAQMEVPHPPPPPLTQSVVTPRFSVSDLPSTTAMAAATATYDLSSLFDPTGQVSWAMQHRAMDPRQYVAHPPSGSIRAEIQAVAGDLSHRHGSPPSPPASSSNASPSLSLSK* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01114 226 MobiDBLite consensus disorder prediction 208 226 - -
Phac8g01114 226 PANTHER LOB DOMAIN CONTAINING PROTEIN 10 123 - -
Phac8g01114 226 Pfam Lateral organ boundaries (LOB) domain 14 112 IPR004883 -
Phac8g01114 226 ProSiteProfiles LOB domain profile. 13 115 IPR004883 -
Phac8g01114 226 MobiDBLite consensus disorder prediction 195 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01114 Phac-Chr8 7833445 7837929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01114 17 226 AS2 family AT2G45420 56.579 3.80e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac8g01114 LOB 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01114 K21994 - gmx:100790517 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g01114 8 7833445 7837929 Phac8g01114 8 7833445 7837929 ECH
Phac8g01114 8 7833445 7837929 Phac10g00959 10 29787393 29792031 PCT