Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01100 ATGGCTACTCATCTTGCTGCAGCAAAGTCCACCATGACGACGTCGTCTCAGGATAAACGACACCGTTCCATCTTCGATGTTCCGTCGAATTTCTTCGACTCTTCCCGCCTTCTCCCTTCCCCTCACTCTTCCGTTTCCGATCACCACACCGCCGGCCAAACCCAAACCCTTGAATCCTCCTCAAACAACGTCGTTTTTCTTGATGACTCTCGAAACGCTGTCGTTTCCGCGCCTAGGTTGACCTGCAACACCTGCAGAACTCAATTCGATTCCCTCAAAGACCAGCGAGCCCATTTCAAATCCGACATTCATCGGTTCAACGTGAAGCTGACGATTGCGGGGAAGAATATTGTGAAGGAAGAAGATTTTGAGGTGCTGACATCTGAATTTGTCAAAGACTATGATGTGTCCAGTATCTCGGGATCAGAAAGCGATGATGATAGTGAAACTGAGTCAAAAAGTCAAATTGTACCGAATGTCAAATCGAGTGAAAATTTTAAACAGAAACTCTTCTTCCTTCTTCAGACAGGGCAGAGAGTTTCTGTCTGGAAGTGCTTGATTATGAATGTGACTGAAAATGTATTATATGCTGATGAAAAGGCAGAGAATGAAGTTGTTCAGAAGTTGAAATCTCTGACTGCTGAGCCCAGAAACAATACTCAGTTGAGGATTGTTCTGCTTGCATCTGGTGGGCACTTTGCAGGTTGTGTCTTTGATGGTGATGCTGTTGTGGCTCACAAGACATTTCACAGATATGTTGTAAGGGCCAAGGCAGGAAAAAAACAATCATCAAAAGATGCTTCTGGCGGGGGTATACATTCTGCTGGGGCCTCACTTCGTCGTTATAATGAACTCGCATTAAAGAAGGAAGTGCATGAACTCTTTACTGCTTGGAAACCTTATTTTGATGCCTCCAATTGCGTGTATATACATGCACCTTCAAGTAGTCGTCAACTGCTTTATGATGGAGAAAGATCGTATTTTGGCAATCAGCAGTGTGCTATTAGAAACATTGCTTTGACAGTTCGGAGGCCTACTTTAAGGGAAGCAAAGCGTGTATATAGTCAGTTGACCCAGGTAACCTACGAAGCTGATGAGAAGGAAGTTTTACAAAGCAAACAAGAGGATTTGGTATCAGTTCACATTTCTAAAATAAATAGCAGTCCAACCTCTGACCAATGTAATGGGGCTGTGTTGGATGACAAAGATAAAGCTGAAGCTTGTTCAAGTAAACAAAATGATGCACTCTCCGTTTCGAGTAATGGAGAAAGTGAGAATGAGCAATCTGGTAAATCAACTCCTTTACATCAAGCAGCCCAATCTGGTGACTCTGTAAAGGTTTTGGAGCTCCTGGAACAGGGCTTGGATCCTTGTGCCAAAGATGAAAGGGGGCGGACCCCATATATGTTGGCACATGACAAAGAAACGAGGAATAATTTCAGAAGATTTATGGCATCAAATCTTGACAAATGGGATTGGCATGCTGCAAAAGTGCCCAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCTGCTAAGCAGGCAGAAAAAGATGCTAAGAGAAAAGCAAGAGCAAAGGAATTAAAGAAATTGCGTAAAGCAAAAGAAAAGAAGGCTCAGGTTGAAGCCACCTTGCCAAAGAATGATTCCAAAACTGTAGAGAAGCAAGTAACTACTTCAACATCGATAAAGGGACAATCTCAACTAAAAAGTGGCGTGCAATTATCCAAAGAGGACCAAATAAGAATGGCACAGGCTGCCGAAAGAGAAAAGCGAGCAGCTGCTGCTGAGAGGAGAATAGCTGCTCTCAAAATTCAAGCTAACAGTACGACAGCTGCACCTAGCATGTCAGAGCCTAAAAGTGGATTAGCCGGTGACATTTACTGTTCCTGTTGTAATTCATCACTTGCTGGTAAAGTTCCCTTCCACCGGTATAATTACAAATACTGCAGCACATCATGCATGCATGTACACAAGGACATCCTAGAAGATCAATGA 1998 0.4324 MATHLAAAKSTMTTSSQDKRHRSIFDVPSNFFDSSRLLPSPHSSVSDHHTAGQTQTLESSSNNVVFLDDSRNAVVSAPRLTCNTCRTQFDSLKDQRAHFKSDIHRFNVKLTIAGKNIVKEEDFEVLTSEFVKDYDVSSISGSESDDDSETESKSQIVPNVKSSENFKQKLFFLLQTGQRVSVWKCLIMNVTENVLYADEKAENEVVQKLKSLTAEPRNNTQLRIVLLASGGHFAGCVFDGDAVVAHKTFHRYVVRAKAGKKQSSKDASGGGIHSAGASLRRYNELALKKEVHELFTAWKPYFDASNCVYIHAPSSSRQLLYDGERSYFGNQQCAIRNIALTVRRPTLREAKRVYSQLTQVTYEADEKEVLQSKQEDLVSVHISKINSSPTSDQCNGAVLDDKDKAEACSSKQNDALSVSSNGESENEQSGKSTPLHQAAQSGDSVKVLELLEQGLDPCAKDERGRTPYMLAHDKETRNNFRRFMASNLDKWDWHAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQVEATLPKNDSKTVEKQVTTSTSIKGQSQLKSGVQLSKEDQIRMAQAAEREKRAAAAERRIAALKIQANSTTAAPSMSEPKSGLAGDIYCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHKDILEDQ* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01100 665 MobiDBLite consensus disorder prediction 1 20 - -
Phac8g01100 665 MobiDBLite consensus disorder prediction 409 441 - -
Phac8g01100 665 MobiDBLite consensus disorder prediction 531 571 - -
Phac8g01100 665 MobiDBLite consensus disorder prediction 137 156 - -
Phac8g01100 665 Pfam Vms1-associating treble clef domain 628 661 IPR041540 -
Phac8g01100 665 MobiDBLite consensus disorder prediction 38 59 - -
Phac8g01100 665 SUPERFAMILY Ankyrin repeat 431 483 IPR036770 -
Phac8g01100 665 MobiDBLite consensus disorder prediction 410 440 - -
Phac8g01100 665 Pfam Bacteroidetes VLRF1 release factor 224 362 IPR041175 -
Phac8g01100 665 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 14 664 IPR047139 -
Phac8g01100 665 ProSitePatterns Zinc finger C2H2 type domain signature. 82 104 IPR013087 -
Phac8g01100 665 Gene3D - 396 497 IPR036770 -
Phac8g01100 665 Coils Coil 506 544 - -
Phac8g01100 665 ProSiteProfiles Ankyrin repeat profile. 430 462 IPR002110 GO:0005515
Phac8g01100 665 Coils Coil 577 613 - -
Phac8g01100 665 MobiDBLite consensus disorder prediction 545 571 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01100 19 612 C2H2 Transcription Factor Family AT1G01930 51.629 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01100 K26089 - gmx:100527709 1032.71