Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01072 ATGCAAAACTCTAGCGAATCTTCTCCAGCTTCCCCTGTGCCGGTGGACTCCGTGCCGTTCCTCCCACTGAGCCGCCGTGTCTCCCGCCGTGCGCCGCTGCGGACGGCGTCCAGCTTCTTCCGGCGCGCGAGCGGGCGGCGCCTTATGCTGGGAGAGGCTTCGGTGCGCGTGCGGGAGGCGGCTGCGGCGGAGGTGGAGGAGCGGCAGAGCGAATGGGCGTACTCGCGGCCGGTGGTGGCGGTAGACGTGCTGTGGAACGCGGCGTTTCTGGTGATCGGCGCGTCGGTGCTGTGGCTGGGCTCTGCGGAGGAGCCGAGCGTGCCGCTGAGGACGTGGATTGTGGGGTATTTGGTGCAGGGCATGCTCCACTCTCTCTGCGTCCTCATTGAGTTCCGAAGGAGAATGATGAGTGGGACCCATTTCCGTTCCAATGTGCCAAACCATGTTCAATGGAGCTTCACTTCTGAAAGTGACCAAGAGTTTTATGCTTTCGAACCCACTCACCACGGTGATGAACACAGCATCATAAAATACATAGAGTCGGCAAATACCATGCTTTCATTTATATGGTGGACTGTTGGGGTCTACTGGGTAACTCTTGGTGGCCAGAGTTTGACAACGGATGCACCTCAGCTTTACTGGGTCTGTATTGCATTTCTTTCTTTCGACGTTGTGATTGTACTGATCTGTGTTGCTGTTGCATGCCTTATTGGTATTGCTGTTTGCTGTTGTCTTCCATGCATCCTTGCTCTCCTGTATGCAGTGACAGATCAGGAAGGGGCAACGAAGGAAGAGATTGACCAGTTGCCAAAATATAAGTTCAGAATAATAAAAGAAGGTGATATTGAAGAACCTTCGAGAGGAATAATGACCGAATCTGAGAGTGAGAGAGCCACTGAACATGTTGTTGCTTTAGAAGATGCAGAATGCTGTATCTGCCTCTCTCCATATGATGATGGTGCTGAACTCAGAGAACTTCCTTGCAACCACCATTTTCATAGAACATGCATAGACAAATGGCTGCTAATCAATGCTACCTGCCCTCTCTGCAAGCTTGACATTTTGATTGGAAGCCACCATCAAGAAGTTTGA 1092 0.522 MQNSSESSPASPVPVDSVPFLPLSRRVSRRAPLRTASSFFRRASGRRLMLGEASVRVREAAAAEVEERQSEWAYSRPVVAVDVLWNAAFLVIGASVLWLGSAEEPSVPLRTWIVGYLVQGMLHSLCVLIEFRRRMMSGTHFRSNVPNHVQWSFTSESDQEFYAFEPTHHGDEHSIIKYIESANTMLSFIWWTVGVYWVTLGGQSLTTDAPQLYWVCIAFLSFDVVIVLICVAVACLIGIAVCCCLPCILALLYAVTDQEGATKEEIDQLPKYKFRIIKEGDIEEPSRGIMTESESERATEHVVALEDAECCICLSPYDDGAELRELPCNHHFHRTCIDKWLLINATCPLCKLDILIGSHHQEV* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01072 363 ProSiteProfiles Zinc finger RING-type profile. 310 351 IPR001841 -
Phac8g01072 363 PANTHER TARGET OF ERK KINASE MPK-1 48 354 - -
Phac8g01072 363 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 288 355 IPR013083 -
Phac8g01072 363 SMART ring_2 310 350 IPR001841 -
Phac8g01072 363 Pfam Ring finger domain 309 351 IPR001841 -
Phac8g01072 363 SUPERFAMILY RING/U-box 294 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01072 Phac-Chr8 7414255 7419293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01072 7 361 C3H Transcription Factor Family AT1G68070 47.222 2.51e-108 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01072 - - gmx:100795425 521.931