Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01043 ATGGTGGAAGATGGTGATGCAGTTGATGCACGGTCCACAGAAGAGTGGTTGTTGCATGCACAGGAACTTGTTCCCGTTGTCCTTGATAAGGCAAGAGAGGTTAAGGGATTTGCTGGTAGATGGAAGATGATCATTGCAAAATTGGAACAGATCCCCTCGCGATTATCAGATTTGTCAAGCCATCCGTGCTTCTCAAAAAATGCTCTGTGCAAGGAGCAGTTGCAGGCTGTGTCGAAGACACTAGGGGAAGCGATTGAATTAGCTGAGTTGTGTATGAAGGAGAAGTATGAGGGTAAGCTTCGGATGCAGAGTGATCTAGATGCATTGACTGGGAAGCTTGATTTGAATTTGAGGGATTGTGGGCTTTTGATCAAAACTGGTGTGCTGGGTGAGGCTACTTTACCATTGGCTGTGTCTAGTTCTGTGGCAGAATCAGATGTTGCAACACACAACATCAGGGAATTGCTGGCGCGCCTTCAGATTGGCCACTTGGAAGCGAAGCACCAAGCTCTAGACAGCGTTGTTGAGGCCATGAAGGAAGATGAGAAGAATGTTTTAGCTGCTCTTGGTCGGAGCAACATTGCTGCTTTGGTTCAATTGCTTACAGCTACCTCTCCCAGAATAAGAGAGAAAACCGTTACTGTTATATGCTCGCTTGCGGAATCTGGTAGTTGCGAAAATTGGCTAGTTTCCGAGGGAGTTCTGCCACCTCTTATAAGGCTTGTTGAATCTGGCAGTGCAGTGGGGAAGGAGAAGGCCACAATATCCCTTCAGAGGTTGTCAATGTCAGCCGAAACAGCCCGTGAAATCGTGGGGCATGGTGGGGTTCCTCCATTGGTTGAACTTTGTCAAATTGGTGACTCTGTGTCACAGGCTGCGGCTGCTTGTACTCTGAAGAACATATCAGCTGTGCCTGAGGTGAGACAAACTTTGTCTGAAGAAGGGATTGTGAGGATCATGATCAATCTGCTTAACTGTGGAATTCTATTAGGTTCCAAAGAGCATGCTGCAGAATGTTTGCAGAATCTCACTGCAAGCAATGAGAATCTAAGGAGGAGTGTCATATCAGAAGGTGGAGTCAGGAGTCTTCTGGCTTATCTTGATGGTCCACTTCCTCAAGAATCCGCTGTTGGAGCATTGAGAAATTTGGTCGGATCGGTCCCAGAGGAATCCTTGGTCTCTCTTGGTTTGGTCCCCCGATTGGTTCATGTGTTGAAGTCCGGATCCTTAGGTGCTCAGCAAGCCGCAGCAGCCGCAATATGCCGAGTTTGCAGCTCCACAGACATGAAGAAAATGGTTGGTGAAGCTGGTTGCATCCCTCTCCTTGTGAAAATGCTTGAGGCCAAGTCAAACAGTGCCAGAGAGGTAGCTGCTCAAGCAATTGCAAGCCTGATTGTTGTGTCTCAGAATAGGAGAGAAGTTAAGAAGGATGATAAAAGTGTGCCAAACTTGGTTCAGTTGCTTGATCCAAGTCCTCAGAACACTGCAAAAAAATATGCAGTCACTTGCCTTGGATCACTTTCTTCAAGTAAGAAATGTAAGAAGCTAATGATCTCGTATGGGGCAATTGGGTATCTGAAGAAACTTACTGAGATGGACATTCCAGGAGCTAAAAAGCTACACGAACGGTTGGAAAGAGGAAAATTAAGAAGTTTGTTTAGCAAGAAATAG 1671 0.4626 MVEDGDAVDARSTEEWLLHAQELVPVVLDKAREVKGFAGRWKMIIAKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLGEAIELAELCMKEKYEGKLRMQSDLDALTGKLDLNLRDCGLLIKTGVLGEATLPLAVSSSVAESDVATHNIRELLARLQIGHLEAKHQALDSVVEAMKEDEKNVLAALGRSNIAALVQLLTATSPRIREKTVTVICSLAESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMSAETAREIVGHGGVPPLVELCQIGDSVSQAAAACTLKNISAVPEVRQTLSEEGIVRIMINLLNCGILLGSKEHAAECLQNLTASNENLRRSVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVPEESLVSLGLVPRLVHVLKSGSLGAQQAAAAAICRVCSSTDMKKMVGEAGCIPLLVKMLEAKSNSAREVAAQAIASLIVVSQNRREVKKDDKSVPNLVQLLDPSPQNTAKKYAVTCLGSLSSSKKCKKLMISYGAIGYLKKLTEMDIPGAKKLHERLERGKLRSLFSKK* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01043 556 Pfam Armadillo/beta-catenin-like repeat 267 303 IPR000225 GO:0005515
Phac8g01043 556 Pfam Armadillo/beta-catenin-like repeat 427 464 IPR000225 GO:0005515
Phac8g01043 556 Pfam Armadillo/beta-catenin-like repeat 391 424 IPR000225 GO:0005515
Phac8g01043 556 Gene3D - 389 536 IPR011989 -
Phac8g01043 556 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 11 554 - -
Phac8g01043 556 SUPERFAMILY ARM repeat 152 533 IPR016024 -
Phac8g01043 556 Gene3D - 148 388 IPR011989 -
Phac8g01043 556 SMART arm_5 386 425 IPR000225 GO:0005515
Phac8g01043 556 SMART arm_5 467 509 IPR000225 GO:0005515
Phac8g01043 556 SMART arm_5 263 303 IPR000225 GO:0005515
Phac8g01043 556 SMART arm_5 304 345 IPR000225 GO:0005515
Phac8g01043 556 SMART arm_5 426 466 IPR000225 GO:0005515
Phac8g01043 556 SMART arm_5 346 385 IPR000225 GO:0005515
Phac8g01043 556 SMART arm_5 181 221 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01043 Phac-Chr8 7041965 7044240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01043 396 539 U-box Gene Family AT3G54790 28.472 3.57e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01043 - - gmx:100789140 976.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac8g01043 8 7041965 7044240 Phac8g01043 8 7041965 7044240 ECH