Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01042 ATGAGGAGAAAGAAGGGAAAGCACACAGCTAAGAAAGACTTCTACTTTTCTCAAACCACTGATAAGGCTAATCATCAGTTCTGCGCCTACCAAACCAAAACCATGGTGGAAGATGGTGATGCAGTTGATGCACGGTCCACAGAAGAGTGGTTGTTGCATGCACAGGAACTTGTTCCCGTTGTCCTTGATAAGGCAAGAGAGGTTAAGGGATTTGCTGGTAGATGGAAGATGATCATTGCAAAATTGGAACAGATCCCCTCGCGATTATCAGATTTGTCAAGCCATCCGTGCTTCTCAAAAAATGCTCTGTGCAAGGAGCAGTTGCAGGCTGTGTCGAAGACACTAGGGGAAGCGATTGAATTAGCTGAGTTGTGTATGAAGGAGAAGTATGAGGGTAAGCTTCGGATGCAGAGTGATCTAGATGCATTGACTGGGAAGCTTGATTTGAATTTGAGGGATTGTGGGCTTTTGATCAAAACTGGTGTGCTGGGTGAGGCTACTTTACCATTGGCTGTGTCTAGTTCTGTGGCAGAATCAGATGTTGCAACACACAACATCAGGGAATTGCTGGCGCGCCTTCAGATTGGCCACTTGGAAGCGAAGCACCAAGCTCTAGACAGCGTTGTTGAGGCCATGAAGGAAGATGAGAAGAATGTTTTAGCTGCTCTTGGTCGGAGCAACATTGCTGCTTTGGTTCAATTGCTTACAGCTACCTCTCCCAGAATAAGAGAGAAAACCGTTACTGTTATATGCTCGCTTGCGGAATCTGGTAGTTGCGAAAATTGGCTAGTTTCCGAGGGAGTTCTGCCACCTCTTATAAGGCTTGTTGAATCTGGCAGTGCAGTGGGGAAGGAGAAGGCCACAATATCCCTTCAGAGGTTGTCAATGTCAGCCGAAACAGCCCGTGAAATCGTGGGGCATGGTGGGGTTCCTCCATTGGTTGAACTTTGTCAAATTGGTGACTCTGTGTCACAGGCTGCGGCTGCTTGTACTCTGAAGAACATATCAGCTGTGCCTGAGGTGAGACAAACTTTGTCTGAAGAAGGGATTGTGAGGATCATGATCAATCTGCTTAACTGTGGAATTCTATTAGGTTCCAAAGAGCATGCTGCAGAATGTTTGCAGAATCTCACTGCAAGCAATGAGAATCTAAGGAGGAGTGTCATATCAGAAGGTGGAGTCAGGAGTCTTCTGGCTTATCTTGATGGTCCACTTCCTCAAGAATCCGCTGTTGGAGCATTGAGAAATTTGGTCGGATCGGTCCCAGAGGAATCCTTGGTCTCTCTTGGTTTGGTCCCCCGATTGGTTCATGTGTTGAAGTCCGGATCCTTAGGTGCTCAGCAAGCCGCAGCAGCCGCAATATGCCGAGTTTGCAGCTCCACAGACATGAAGAAAATGGTTGGTGAAGCTGGTTGCATCCCTCTCCTTGTGAAAATGCTTGAGGCCAAGTCAAACAGTGCCAGAGAGGTAGCTGCTCAAGCAATTGCAAGCCTGATTGTTGTGTCTCAGAATAGGAGAGAAGTTAAGAAGGATGATAAAAGTGTGCCAAACTTGGTTCAGTTGCTTGATCCAAGTCCTCAGAACACTGCAAAAAAATATGCAGTCACTTGCCTTGGATCACTTTCTTCAAGTAAGAAATGTAAGAAGCTAATGATCTCGTATGGGGCAATTGGGTATCTGAAGAAACTTACTGAGATGGACATTCCAGGAGCTAAAAAGCTACACGAACGGTTGGAAAGAGGAAAATTAAGAAGTTTGTTTAGCAAGAAATAG 1773 0.4602 MRRKKGKHTAKKDFYFSQTTDKANHQFCAYQTKTMVEDGDAVDARSTEEWLLHAQELVPVVLDKAREVKGFAGRWKMIIAKLEQIPSRLSDLSSHPCFSKNALCKEQLQAVSKTLGEAIELAELCMKEKYEGKLRMQSDLDALTGKLDLNLRDCGLLIKTGVLGEATLPLAVSSSVAESDVATHNIRELLARLQIGHLEAKHQALDSVVEAMKEDEKNVLAALGRSNIAALVQLLTATSPRIREKTVTVICSLAESGSCENWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMSAETAREIVGHGGVPPLVELCQIGDSVSQAAAACTLKNISAVPEVRQTLSEEGIVRIMINLLNCGILLGSKEHAAECLQNLTASNENLRRSVISEGGVRSLLAYLDGPLPQESAVGALRNLVGSVPEESLVSLGLVPRLVHVLKSGSLGAQQAAAAAICRVCSSTDMKKMVGEAGCIPLLVKMLEAKSNSAREVAAQAIASLIVVSQNRREVKKDDKSVPNLVQLLDPSPQNTAKKYAVTCLGSLSSSKKCKKLMISYGAIGYLKKLTEMDIPGAKKLHERLERGKLRSLFSKK* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01042 590 Gene3D - 423 570 IPR011989 -
Phac8g01042 590 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 43 588 - -
Phac8g01042 590 SMART arm_5 420 459 IPR000225 GO:0005515
Phac8g01042 590 SMART arm_5 501 543 IPR000225 GO:0005515
Phac8g01042 590 SMART arm_5 297 337 IPR000225 GO:0005515
Phac8g01042 590 SMART arm_5 460 500 IPR000225 GO:0005515
Phac8g01042 590 SMART arm_5 338 379 IPR000225 GO:0005515
Phac8g01042 590 SMART arm_5 380 419 IPR000225 GO:0005515
Phac8g01042 590 SMART arm_5 215 255 IPR000225 GO:0005515
Phac8g01042 590 Gene3D - 176 364 IPR011989 -
Phac8g01042 590 SUPERFAMILY ARM repeat 186 567 IPR016024 -
Phac8g01042 590 Pfam Armadillo/beta-catenin-like repeat 301 337 IPR000225 GO:0005515
Phac8g01042 590 Pfam Armadillo/beta-catenin-like repeat 461 498 IPR000225 GO:0005515
Phac8g01042 590 Gene3D - 365 422 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01042 Phac-Chr8 7040303 7044240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01042 430 573 U-box Gene Family AT3G54790 28.472 2.84e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01042 - - gmx:100789140 976.081