Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01034 ATGTTGGGCTCAGGTACCAATTTGGTGACCACGGTCATTGGGTTTGGCATGAGTGCCACTTTCATTGTGTTTGTCTGCACCAGAATCATTTGTGGAAGGTTAAGAGGGGGTGTTGAATCTCGGATGGTGTATGAGATTGAATCAAGAATTGATGTAGAACAGCCAGAACATCATGTTAATGACCCTGAATCAGAACCTGTTCTGCTTGATGCAATCCCTACTTTGAAGTTCAACCAAGAGGCTTTCAGTTCCCTTGAACACACACAGTGTGTAATATGTTTGGCAGATTACAAAGAAAGAGAAGTATTGCGTATCATGCCCAAATGTGGCCACACTTTTCATCTTTCTTGCATTGATATATGGCTGAGAAAACAATCTACCTGTCCAGTATGCCGTCTGCCATTGAAAAACTCTTCTGAAACAAAACATGCGAGACCTGTGACGTTTACCATGAGCCAATCCCTTGATGAGTCTCACACATCAGAAAGAAATGAAAATATAGAGAGACATGTTGAACCTACTCCTACTCAAGCCAGTGACTCTTTACAACCAAATCCAGGTGAACAAGGAGCAAGACAATCTTAG 585 0.4205 MLGSGTNLVTTVIGFGMSATFIVFVCTRIICGRLRGGVESRMVYEIESRIDVEQPEHHVNDPESEPVLLDAIPTLKFNQEAFSSLEHTQCVICLADYKEREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCRLPLKNSSETKHARPVTFTMSQSLDESHTSERNENIERHVEPTPTQASDSLQPNPGEQGARQS* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01034 194 MobiDBLite consensus disorder prediction 142 194 - -
Phac8g01034 194 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 142 IPR013083 -
Phac8g01034 194 MobiDBLite consensus disorder prediction 142 157 - -
Phac8g01034 194 MobiDBLite consensus disorder prediction 171 194 - -
Phac8g01034 194 SUPERFAMILY RING/U-box 80 138 - -
Phac8g01034 194 ProSiteProfiles Zinc finger RING-type profile. 90 132 IPR001841 -
Phac8g01034 194 PANTHER OS11G0150450 PROTEIN 1 166 - -
Phac8g01034 194 SMART ring_2 90 131 IPR001841 -
Phac8g01034 194 CDD RING-H2_EL5-like 89 132 - -
Phac8g01034 194 Pfam Ring finger domain 89 132 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g01034 Phac-Chr8 6911776 6914521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01034 79 194 C3H Transcription Factor Family AT4G10160 36.975 6.55e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01034 - - gmx:100780922 372.474