Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g01031 ATGGGGGTTGGTGCTAATTTCTGGGAGCTGCTAAAGCCCTATGCACGCCACGAGGATTTTGATTTCTTGAGGAACAAGCGAGTTGCTGTGGACCTTTCATTCTGGATTGTTCAGCATGAGAATGCCATGAAAGCCACTCATGTCCGAAAACCTCACCTCAGACTTACCTTCTTCCGCACCATCAATCTCTTCTCCAAGTTTGGGGCATTTCCTGTGTTCATTGTTGATGGGACTCCATCACCATTGAAAACACAGGCCAGGATTGCAAGATTTTTTCGGTCTTCTGGCATTGAGTTGACTAGCTTGCCAGTGTCGGAAGGTGTTTCACCTCAGAGGAGCCGCATGTTTTCAAATCGAGTTCAAGAATGTGTGGAACTGGTCAAACTACTAGGAATGCCTGTACTAAAGGCTAAAGGAGAGGCCGAAGCACTCTGTGCTCAATTAAATAGTGAAGGTCATGTAGATGCTTGCATCACAGCTGACAGTGATGCATTCCTCTTTGGGGCCAAATGCATTATAAAATGTTTCTGTCCCAATTCCAAAGAACCGTTTGAATGCTACAATATGTCAGATATTGAAGCTGGACTTGGATTGAAGAGGAAACACTTGATAGCTATCTCTCTTTTGGTTGGAAATGATCATGATATGAATGGTGTTCGAGGAATTGGGCTTGATAATGCACTTCATTTTGTTAAAGCTTTTAATGAAGATGATATATTGAATAGATTACAGGAGATAGGCAAAGGGGGCAATACTTCACAAATTCCCAGCTGCACTATATTTGAGGACAATATAGATGTTGATGGAAACTACCCGAATAGGAAACAATCTCATTGCTCATTTTGTGGGCATCCTGGCAGCAAGAAAGATCATATGAAAATTTCTTGTGAATACTGTGTCACAAAGGATGATGAAGGCTGCCAGAGAAAACCAGAGGGTTTTAAATGTCATTGCTTCTCATGTGTTTCGAATAGGAGACATAAGGAGCAAAAAAGAGAGGAAAATTGGTACTCAAAAATTTGTCACAAAATTGCAGAGGAGCCAAACTTTCCCAAAGATGAGATCATTGACATGTATTTATGCAATGACAACGGTTACTTTTCAGTAAGTGATGGTCCACAGATTATGTGGGGAAAACCCAATATTGAGATGCTGATTGATTTTCTAAACTTCCATCAGCGTTGGGAACCATCATACATTCGACGGACTATGTTTCCTATGATGTCCACCATCTTTCTGAGAGATATGTCTACACCTACCCGAGAAACTTTGTTATTTGGTCAATATGAGTTTGATTCAGTTGAACGTGTGAAGATGAGATATGGATATCAGTTTTATGTGGTCAAGTGGAGACGTGCTGGCGGAAACATTACCACCAGCAAAGTTCCATCAAATGAATCCAATGTGCAACAAGATGTAGTAGAGCTTGATGAAATGGTGGATCTACTGGACGACTGCAGCATTCCTGAGATTCGTGTAGATGATGGATGCAGTTTTCTGTTTACTGATGAAAATATGGACCTAGTAGGAACTGCTTTTCCAGCAGAAGTCAAAAGTTTTTTGCAGGAGCAGGAAAGGAAAAGTAGAAAGAGTTCAACATCAAGGTGCCAAGAAAATGAAATATCAGCTTCTCCAAACCCAAGAACTACTCAGCTAAACATCACAGAGTTCTTTCCATCAACCAAAATTAAACATCGTCAATCAAAACAAAGAGAAGAATCATCTAATGATGCTGATTGTGAGGGCAGCAAGGGTTCAAAAATGAAAAGAAAAATGTCTAATCCTGACAAGCTTCCAAAATCTGTGAGGCGTCGCCTTTTGTTTGACCAGTGA 1833 0.4075 MGVGANFWELLKPYARHEDFDFLRNKRVAVDLSFWIVQHENAMKATHVRKPHLRLTFFRTINLFSKFGAFPVFIVDGTPSPLKTQARIARFFRSSGIELTSLPVSEGVSPQRSRMFSNRVQECVELVKLLGMPVLKAKGEAEALCAQLNSEGHVDACITADSDAFLFGAKCIIKCFCPNSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDMNGVRGIGLDNALHFVKAFNEDDILNRLQEIGKGGNTSQIPSCTIFEDNIDVDGNYPNRKQSHCSFCGHPGSKKDHMKISCEYCVTKDDEGCQRKPEGFKCHCFSCVSNRRHKEQKREENWYSKICHKIAEEPNFPKDEIIDMYLCNDNGYFSVSDGPQIMWGKPNIEMLIDFLNFHQRWEPSYIRRTMFPMMSTIFLRDMSTPTRETLLFGQYEFDSVERVKMRYGYQFYVVKWRRAGGNITTSKVPSNESNVQQDVVELDEMVDLLDDCSIPEIRVDDGCSFLFTDENMDLVGTAFPAEVKSFLQEQERKSRKSSTSRCQENEISASPNPRTTQLNITEFFPSTKIKHRQSKQREESSNDADCEGSKGSKMKRKMSNPDKLPKSVRRRLLFDQ* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g01031 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 71 90 IPR006084 -
Phac8g01031 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 203 218 IPR006084 -
Phac8g01031 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 127 144 IPR006084 -
Phac8g01031 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 25 39 IPR006084 -
Phac8g01031 610 PRINTS Xeroderma pigmentosum group G/yeast RAD superfamily signature 148 168 IPR006084 -
Phac8g01031 610 Gene3D - 198 259 - -
Phac8g01031 610 Gene3D - 5 197 - -
Phac8g01031 610 SUPERFAMILY PIN domain-like 6 213 IPR029060 -
Phac8g01031 610 FunFam Flap endonuclease GEN-like 1 198 255 - -
Phac8g01031 610 CDD PIN_GEN1 2 202 - -
Phac8g01031 610 MobiDBLite consensus disorder prediction 535 561 - -
Phac8g01031 610 PANTHER FLAP ENDONUCLEASE FAMILY MEMBER 1 567 IPR006084 -
Phac8g01031 610 SMART xpgineu 128 198 IPR006086 GO:0004518
Phac8g01031 610 MobiDBLite consensus disorder prediction 562 610 - -
Phac8g01031 610 FunFam Flap endonuclease GEN-like 1 2 197 - -
Phac8g01031 610 Pfam XPG N-terminal domain 1 90 IPR006085 GO:0004518
Phac8g01031 610 SUPERFAMILY 5' to 3' exonuclease, C-terminal subdomain 198 416 IPR036279 -
Phac8g01031 610 Pfam XPG I-region 131 213 IPR006086 GO:0004518
Phac8g01031 610 MobiDBLite consensus disorder prediction 522 610 - -
Phac8g01031 610 SMART xpgn3 1 97 IPR006085 GO:0004518
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g01031 16 232 Core DNA Replication Machinery Family AT5G26680 27.966 4.67e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g01031 K15338 - gmx:100779848 987.252