LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac8g00994	ATGAACATGGATATGGCTTGTAGTTTGCCGCAGTCAAGAATGTTGCACGGAGGTGTGGGGACGAGTTACAGACACGGATCAGTTGGTCAGTTAGGTTGTTTTGATTTTAGAGGGCGAGGTTTTGGTTGTGCTGTTTTTGACAGCTCGAGAAGTGTTTCAAAATTTCGTGTTAGTGGGATGAGTGTTTCTGCTTGTTGGAGTAACTCCAGAGTGGTTACTGGTAGGGAGTTTAAAGTTTTGAATATTAAGAGAAGTTTGTCTTGTAAGAATAATAGTAATCTTTTTATGGGATCTAGAGTGATTTGGTCGAAGTGCCAGGGTAATGATTCTTTAGCTTATGTTGCTGGCAACGGTCGGACTGTTGATTTTGTGGAAGGTTCAGGTGAGGATGCAGGACTGAGGCCTGTTTCTTGTGTTGAACTGGATGCACCTTTGGAAGAAGAAGGGCAAGCCGAAAGGAGAGAGGGAGGGAGTGAAATAGGAGCAGAGGAACTAAGTGTGGATCAATTGAAAGAACTATTGCAAAAGGCCAGGAAGGAGCTAGAAGTAGCTCAAATAAATAGTACCATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTCTTTGCATGATGAAGCTGTGATTTCTTGCAATAATGTTAATTCTACCCTTGACACCATCAAAGAAATAGCTAATAAAGAGCTTATGGCCAAAGAAGCTGTCCAAAATGCAACAATGGCTCTTTCATTAGCTGAGGCAAGGCTTCAAGTAGCTGTAGAATCGTTGGAGCCTGCAAAAGAAGTTCCTGATTCAGCGCAAGGTTCTAATGATAGCAATGGTGATAAGGACGTGGAAAAAGAGGAGAAAGCTATTTTGTTTGCTCAAGAAGATATCAAGGAATGCCAGGCTAATTTAGCCAATTGTGAGGCTGAGCTGAGGCGCTTGCAAAATAGGAAGGAAGAGTTGCAGAAGGAAGTGAGCAAATTGCAAGAAATTGCTGAAATGGCTCAGCTGAATGCCGCGAAAGCTGAAGAGGATGTTACAAACATAATGCTTTTGGCTGAGCACGCTGTTGCCTTTGAACTGGAGGCAACAAAACGTGTAAATGATGCAGAGATTGCCTTACAGCGAGCAGATAAGTCTAATTCTAATACTGATACCATAGAAACTACCCAAGCACCTGATGCTGAGGCTATTCCTGAGGAGGAGAAAGTAGTTGACTGTTTTTCTGGTGATGTCACTGTTGAAAGAGACAAAGATTTGTCAATTGATGATGAATCTTTGGTTGCAAATTTATCACCTGAAACACTATCTGATAAAGCCAACCAAAATTTAGAAGACAAAACACAGTCTGATTATTTAAGTGATAATGAGAATGCTGTGCAAACAAAAAAGCAGGAAACACAGAAAGATTTGACCAAAGATAGTTCACTCTTTGCTCCCAAGGCATTATTGAAAAAGTCTTCTCGATTCTTTTCTGCATCATACTTTTCTTTTACTGAAGATGGGAGTGAGTTCACACCAGCATCAGTCTTTCAGGGCGTTATACTATCTGTACGGAAGCAGTTGCCCAAACTAATATTTGGATTATTGTTAATGGGAGCAGGGGTTACCTTCTTTGCTAATAAAGTGGATAGGAATGCTCAGCTGCTTCCTCAGGCAGATGTTATCATGATCAGTGTTGAAGAAGTTTCCTCTAGTGCAAAGCCACTGGTTAGATACCTTCACAAACTGCCCAAGAAAATCAAGAAAATTATTGCATCATTACCTCATCAAGAGGTGAATGAGGAAGAAGCCTCCCTCTTTGACATGCTCTGGCTATTACTTGCAAGTGTTATATTCGTTCCAATATTTCAGAAAATCCCTGGAGGCAGTCCTGTTCTTGGCTATTTGGCCGCTGGTATCTTGATTGGGCCATACGGTCTCTCTATCATCCGTCACGTACATGCAACAAAAGCAGTAGCTGAATTTGGAGTCGTCTTCCTTCTTTTCAATATTGGTCTGGAGCTCTCTGTTGAAAGGCTTAGCTCAATGAAGAAATATGTCTTTGGATTAGGCTCTGCACAGGTTTTGGCAACTGCTGTAGCTATTGGTTGGGTGGTTCATTTTATTTGTGGCCAACCTGTTCCTGCTGCTATTGTTGTTGGGAATGGCCTTGCATTATCATCCACTGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCACGACATGGCCGAGCTACTTTTTCTGTGTTACTCTTTCAGGATCTGGCTGTTGTGGTGTTGTTAATACTCATACCTCTTATTTCTCCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCTATTGCTGAAGCACTTGGAATGGCTGCTGTTAAGGCAGCAGTTGCCATTACTGCCATAATTGCAGGGGGGCGATTGCTCCTTCGACCAATATACAAGCAGGTTGCAGAAAATCAAAATGCTGAAATTTTCTCCGCCAATACACTCCTTGTTATTCTTGGCACAAGTCTTCTTACAGCCAGGGCAGGACTTTCCATGGCATTAGGAGCCTTTTTGGCTGGTTTACTGCTGGCAGAAACTGAATTTTCGTTACAGGTTGAATCTGACATTGCTCCATATCGAGGCCTTCTTTTGGGGCTATTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTATCAAACTTCCCAGTCATCGGAGTCACACTAGGACTCTTAATATGTGGCAAGACTATCTTGGTTTCTTTGATGGGTAGAATGTTTGGGATTTCCTTCATTTCTGCCATCAGAGCTGGTCTTCTTCTTGCTCCTGGTGGAGAGTTTGCATTTGTGGCTTTCGGTGACGCCGTTAATCAGGGCATAATGTCTTCCCAGCTGTCATCTTTGCTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACACCATGGCTAGCAGCAGGAGGCCAGCTGATTGCTTCCCGTTTTGAGCAGAGTGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTGGGCCAGATCATTGCCCAACTTCTGTCTGAGCGTCTTATTCCGTTTGTTGCACTAGATGTAAGAAGTGATAGAGTGGCAGTTGGCCGTGGTCTGGGTCTTCCTGTGTACTTTGGGGATGCTGGTAGTAGAGAGGTCTTACATAAGCTTGGAGCTGAAAGGGCATGTGCTGCAGCAATAACACTTGATACACCTGGTGCAAATTATAGAACAGTCTGGGCTCTGAGCAAGTACTTCCCAAATGTGAAGACCTTTGTCCGTGCCCATGACGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACTGCTGTAATATTCTAG	3363	0.4276	MNMDMACSLPQSRMLHGGVGTSYRHGSVGQLGCFDFRGRGFGCAVFDSSRSVSKFRVSGMSVSACWSNSRVVTGREFKVLNIKRSLSCKNNSNLFMGSRVIWSKCQGNDSLAYVAGNGRTVDFVEGSGEDAGLRPVSCVELDAPLEEEGQAERREGGSEIGAEELSVDQLKELLQKARKELEVAQINSTMFEEKVKKISETAISLHDEAVISCNNVNSTLDTIKEIANKELMAKEAVQNATMALSLAEARLQVAVESLEPAKEVPDSAQGSNDSNGDKDVEKEEKAILFAQEDIKECQANLANCEAELRRLQNRKEELQKEVSKLQEIAEMAQLNAAKAEEDVTNIMLLAEHAVAFELEATKRVNDAEIALQRADKSNSNTDTIETTQAPDAEAIPEEEKVVDCFSGDVTVERDKDLSIDDESLVANLSPETLSDKANQNLEDKTQSDYLSDNENAVQTKKQETQKDLTKDSSLFAPKALLKKSSRFFSASYFSFTEDGSEFTPASVFQGVILSVRKQLPKLIFGLLLMGAGVTFFANKVDRNAQLLPQADVIMISVEEVSSSAKPLVRYLHKLPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHATKAVAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVAIGWVVHFICGQPVPAAIVVGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGMAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVIGVTLGLLICGKTILVSLMGRMFGISFISAIRAGLLLAPGGEFAFVAFGDAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQSDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRGLGLPVYFGDAGSREVLHKLGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVIF*	1121

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac8g00994	1120	Gene3D	-	593	981	IPR038770	-
	Phac8g00994	1120	Gene3D	-	1001	1120	-	-
	Phac8g00994	1120	MobiDBLite	consensus disorder prediction	430	468	-	-
	Phac8g00994	1120	MobiDBLite	consensus disorder prediction	260	280	-	-
	Phac8g00994	1120	Pfam	TrkA-N domain	1006	1119	IPR003148	GO:0006813
	Phac8g00994	1120	FunFam	K(+) efflux antiporter 2 chloroplastic	593	979	-	-
	Phac8g00994	1120	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	1002	1119	IPR036291	-
	Phac8g00994	1120	PANTHER	K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC	202	1119	-	-
	Phac8g00994	1120	MobiDBLite	consensus disorder prediction	443	458	-	-
	Phac8g00994	1120	Coils	Coil	280	342	-	-
	Phac8g00994	1120	NCBIfam	monovalent cation:proton antiporter-2 (CPA2) family protein	604	884	IPR004771	GO:0006812\|GO:0008324\|GO:0016020
	Phac8g00994	1120	Pfam	Sodium/hydrogen exchanger family	603	973	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Phac8g00994	1120	Coils	Coil	160	194	-	-
	Phac8g00994	1120	ProSiteProfiles	RCK N-terminal domain profile.	1005	1120	IPR003148	GO:0006813

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac8g00994	Phac-Chr8	6709889	6723361	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Phac8g00994	3	1119	Inorganic Solute Cotransporters	AT4G00630	64.255	0.0	1284

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac8g00994	K03455		-	gmx:100798822	1799.25