Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00986 ATGGGAAGGACACCATGTTGTGACAAGAAGGGTTTGAAGAAGGGACCTTGGACAGCTGAAGAGGATGAAGTTCTTGCTAGTTATATCAAGAAAAATGGTGGCCATGGAAGCTGGCGTTCTCTTCCAAGGATGGCAGGTCTTCTTCGTTGTGGCAAGAGTTGCAGGCTTAGGTGGACAAACTACCTCAGACCTGACATCAAGCGTGGTCCCTTTACACAAGAGGAAGAAAAACTAGTCATACAGCTTCATGGCATCCTAGGAAATAGGTGGGCTGCAATAGCCTCTCAATTACCAGGAAGAACAGACAATGAGATAAAGAACTTGTGGAACACCCACTTGAAGAAGCGTCTTAAAAGCATGGGACTTGACCCTAGAACCCACGAGCCATTGGCCTCATCTCCATCTTACCCCTTCCACAAGGCACATGCATCTGTTTCCACACGCCACATGGCTCAGTGGGAGAGTGCTAGGCTTGAAGCTGAGGCCAGGCTCTCAAATGAGTCAACAAGGTTCAGCCAGAACACCACCAATCCTAATTCAGATGCCAAAACCACTGACTCTGACTACTTTCTCCGCATTTGGAACTCTGAGGTTGGAGAGGCATTTCGCAATGTTGTTGTTCAACACAAAGCTGATGACAACAAAATCACCACTACAAGCTCCTGCCCCAGTCCCCTCTCTGCAGGGTCATCTTCCAACAAATGTGAGTCAATTGCAACAAATGCAGATTTGGCTTCTATTGCACAAGAAACTACGCCCTCTAACTTTGTGAAACAAGAGCTGGAGTGGAGGACTCGTGGATCTGATTCTTCAAGCTCTAATGACATGGAGGATTCATCAGACACTGCTTTGCAGCTCCTGTTAGATTTTCCTATAAACAATGATATGAGCTTCTTAGAAGGAAACTCTTTTATGTGTCCACTTTAG 927 0.4617 MGRTPCCDKKGLKKGPWTAEEDEVLASYIKKNGGHGSWRSLPRMAGLLRCGKSCRLRWTNYLRPDIKRGPFTQEEEKLVIQLHGILGNRWAAIASQLPGRTDNEIKNLWNTHLKKRLKSMGLDPRTHEPLASSPSYPFHKAHASVSTRHMAQWESARLEAEARLSNESTRFSQNTTNPNSDAKTTDSDYFLRIWNSEVGEAFRNVVVQHKADDNKITTTSSCPSPLSAGSSSNKCESIATNADLASIAQETTPSNFVKQELEWRTRGSDSSSSNDMEDSSDTALQLLLDFPINNDMSFLEGNSFMCPL* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00986 308 MobiDBLite consensus disorder prediction 164 184 - -
Phac8g00986 308 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Phac8g00986 308 FunFam MYB transcription factor 70 117 - -
Phac8g00986 308 MobiDBLite consensus disorder prediction 165 184 - -
Phac8g00986 308 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 254 - -
Phac8g00986 308 CDD SANT 16 62 IPR001005 -
Phac8g00986 308 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Phac8g00986 308 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Phac8g00986 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Phac8g00986 308 SMART sant 13 64 IPR001005 -
Phac8g00986 308 SMART sant 67 115 IPR001005 -
Phac8g00986 308 Gene3D - 70 133 - -
Phac8g00986 308 Gene3D - 11 68 - -
Phac8g00986 308 CDD SANT 70 113 IPR001005 -
Phac8g00986 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Phac8g00986 308 FunFam Myb transcription factor 11 68 - -
Phac8g00986 308 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Phac8g00986 308 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00986 Phac-Chr8 6681797 6684934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00986 1 302 MYB Transcription Factor Family AT3G61250 65.359 1.56e-127 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac8g00986 Myb_DNA-binding 7.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00986 K09422 - gmx:100800408 540.036