Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac8g00960 ATGACTATCGTTGGTAAAAGTGTATCATTCCTATGGGTGTTGATCCTTATAGTGTCATCTGCAAATAATTCTAGAGTTTTTGGACAGTTGATTATTGAGGTGACAAATGCTTTGGACAATGGAAGTTTAGACTTAACCGTTGCTTGTCCCAATATTGATGGTAAAAGCTACCTTCTGCATCCTGGTGGTTTCCATGAATGGATTAATAATGGTGCTGCTACTCAATCAGGAGGCCCACCATTCCTTTGTTCTTTTCAGTGGAAAGGAGCATCTCACATGTTTAACATGTACGTTCCTTCTAGGGACAATGATTGCGAAGAGTGTCATTGGTATGTCAAAGAAACTGGACCATGTAGGGTTTATAACCGTCCCAACAAACCTACCATTTGCTCTAATGTATCATTCCTATGGGTGTTGATCCTTATAATGTCATCTGCAAACAATTCTAGAGTTTTTGGACAGTTGATTATTGAGGTGACAAATGCTTTGGACAATGGAAGTTTAGACTTAACTGTTGCTTGCCCCAATATTGATGGTAAAAGCTACCTTCTGCATCCTGGTGGTTTCCATGAATGGATTAATAATGGTGCTGCTACTCAATCAGGAGGCCCACCATTCCTTTGTTCTTTTCAGTGGAAAGGAGCATCTCATATGTTTAACATGTACGTTCCTTCTAGAGACAATGATTGCGAAGAGTGTCATTGGTTTGCCAAAGAAACTGGACCATGTAGGGTGTATAACCGTCCGAACAAACCTACCATTTGCTCTAAATTGAGAAAAGGTACAACAATGGGTATCTTTGATAAAAGTGTATCATTCTTATGGGTGTTTATCCTTGTAGTGTCATCTGCAAACAATTTTAGAGTTTTTGGACAGTTGATCATTGAGGCGACAAATGCTTTGGACAATGGAAGTTTAGACTTAACTATTGCTTGTCCCAATATTGATGGTAAAAGCTATCTTCTGCATCCTGGTGGTTTTCATGAATGGATTAATAATGGTGCTGCTACTCAATCAGGAGGTCCACCATTCCTTTGTTCTTTTCAGTGGAAAGGAGCATCTCACATGTTTAACATGTACGTTCCTTCTAGGGACAATGATTGCGAAGAGTGTCATTGGTTTGTCAAAGAAACTGGACCATGTAGGGTTTATAACCGTCCCAATAAACCTACCATTTGCTCTAATTGGAATTGA 1194 0.3936 MTIVGKSVSFLWVLILIVSSANNSRVFGQLIIEVTNALDNGSLDLTVACPNIDGKSYLLHPGGFHEWINNGAATQSGGPPFLCSFQWKGASHMFNMYVPSRDNDCEECHWYVKETGPCRVYNRPNKPTICSNVSFLWVLILIMSSANNSRVFGQLIIEVTNALDNGSLDLTVACPNIDGKSYLLHPGGFHEWINNGAATQSGGPPFLCSFQWKGASHMFNMYVPSRDNDCEECHWFAKETGPCRVYNRPNKPTICSKLRKGTTMGIFDKSVSFLWVFILVVSSANNFRVFGQLIIEATNALDNGSLDLTIACPNIDGKSYLLHPGGFHEWINNGAATQSGGPPFLCSFQWKGASHMFNMYVPSRDNDCEECHWFVKETGPCRVYNRPNKPTICSNWN* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac8g00960 397 Pfam Plant self-incompatibility protein S1 157 256 IPR010264 -
Phac8g00960 397 Pfam Plant self-incompatibility protein S1 296 396 IPR010264 -
Phac8g00960 397 Pfam Plant self-incompatibility protein S1 32 131 IPR010264 -
Phac8g00960 397 PANTHER - 32 122 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac8g00960 Phac-Chr8 6477058 6481979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac8g00960 340 397 Carbohydrate Esterase AT3G16970 34.921 6.51e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac8g00960 - - pvu:PHAVU_008G064900g 273.092